Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 SAP4YGL229C 2457 nt5.68□□□□□ -1.5
TFA1P36100 PRE4YFR050C 801 nt5.68□□□□□ -1.5
TFA1P36100 SMD1YGR074W 441 nt5.68□□□□□ -1.5
TFA1P36100 ISA1YLL027W 753 nt5.68□□□□□ -1.5
TFA1P36100 GRX8YLR364W 330 nt5.68□□□□□ -1.5
TFA1P36100 GOT1YMR292W 417 nt5.68□□□□□ -1.5
TFA1P36100 GUP1YGL084C 1683 nt5.68□□□□□ -1.5
TFA1P36100 snR46snR46 197 nt5.67□□□□□ -1.5
TFA1P36100 LRE1YCL051W 1752 nt5.67□□□□□ -1.5
TFA1P36100 FPR1YNL135C 345 nt5.66□□□□□ -1.5
TFA1P36100 ENA5YDR038C 3276 nt5.66□□□□□ -1.5
TFA1P36100 ENA2YDR039C 3276 nt5.66□□□□□ -1.5
TFA1P36100 ENA1YDR040C 3276 nt5.66□□□□□ -1.5
TFA1P36100 PTC5YOR090C 1719 nt5.65□□□□□ -1.5
TFA1P36100 TAF7YMR227C 1773 nt5.65□□□□□ -1.5
TFA1P36100 YLR255CYLR255C 354 nt5.65□□□□□ -1.5
TFA1P36100 LSM7YNL147W 348 nt5.65□□□□□ -1.5
TFA1P36100 YBL109WYBL109W 336 nt5.65□□□□□ -1.5
TFA1P36100 NUT2YPR168W 474 nt5.65□□□□□ -1.5
TFA1P36100 tX(XXX)DtX(XXX)D 100 nt5.64□□□□□ -1.51
TFA1P36100 RGM1YMR182C 636 nt5.64□□□□□ -1.51
TFA1P36100 CUL3YGR003W 2235 nt5.63□□□□□ -1.51
TFA1P36100 FAS2YPL231W 5664 nt5.63□□□□□ -1.51
TFA1P36100 PSK1YAL017W 4071 nt5.63□□□□□ -1.51
TFA1P36100 KSP1YHR082C 3090 nt5.63□□□□□ -1.51
TFA1P36100 MLH2YLR035C 2088 nt5.62□□□□□ -1.51
TFA1P36100 SPT23YKL020C 3249 nt5.62□□□□□ -1.51
TFA1P36100 YDL242WYDL242W 354 nt5.62□□□□□ -1.51
TFA1P36100 SNA2YDR525W-A 240 nt5.62□□□□□ -1.51
TFA1P36100 YGL217CYGL217C 342 nt5.62□□□□□ -1.51
TFA1P36100 tR(ACG)JtR(ACG)J 73 nt5.62□□□□□ -1.51
TFA1P36100 YOR376WYOR376W 369 nt5.62□□□□□ -1.51
TFA1P36100 PEX8YGR077C 1770 nt5.6□□□□□ -1.51
TFA1P36100 RPG1YBR079C 2895 nt5.6□□□□□ -1.51
TFA1P36100 ECM15YBL001C 315 nt5.6□□□□□ -1.51
TFA1P36100 YML037CYML037C 1023 nt5.6□□□□□ -1.51
TFA1P36100 TMN3YER113C 2121 nt5.59□□□□□ -1.51
TFA1P36100 YOR381W-AYOR381W-A 168 nt5.59□□□□□ -1.51
TFA1P36100 YPR002C-AYPR002C-A 198 nt5.59□□□□□ -1.51
TFA1P36100 RPA135YPR010C 3612 nt5.59□□□□□ -1.51
TFA1P36100 ORC2YBR060C 1863 nt5.58□□□□□ -1.52
TFA1P36100 YOR333CYOR333C 417 nt5.58□□□□□ -1.52
TFA1P36100 MGR2YPL098C 342 nt5.58□□□□□ -1.52
TFA1P36100 ROG1YGL144C 2058 nt5.58□□□□□ -1.52
TFA1P36100 PDE2YOR360C 1581 nt5.58□□□□□ -1.52
TFA1P36100 UBP11YKR098C 2154 nt5.57□□□□□ -1.52
TFA1P36100 PFK26YIL107C 2484 nt5.57□□□□□ -1.52
TFA1P36100 GIS4YML006C 2325 nt5.57□□□□□ -1.52
TFA1P36100 EFR3YMR212C 2349 nt5.57□□□□□ -1.52
TFA1P36100 CHO2YGR157W 2610 nt5.57□□□□□ -1.52
TFA1P36100 YBL053WYBL053W 375 nt5.57□□□□□ -1.52
TFA1P36100 MET5YJR137C 4329 nt5.57□□□□□ -1.52
TFA1P36100 ATG2YNL242W 4779 nt5.56□□□□□ -1.52
TFA1P36100 VPH1YOR270C 2523 nt5.56□□□□□ -1.52
TFA1P36100 SKG6YHR149C 2205 nt5.56□□□□□ -1.52
TFA1P36100 YPR089WYPR089W 2667 nt5.56□□□□□ -1.52
TFA1P36100 VPS35YJL154C 2835 nt5.56□□□□□ -1.52
TFA1P36100 ERP6YGL002W 651 nt5.56□□□□□ -1.52
TFA1P36100 SNC2YOR327C 348 nt5.56□□□□□ -1.52
TFA1P36100 SEN1YLR430W 6696 nt5.56□□□□□ -1.52
TFA1P36100 RPS27BYHR021C 249 nt5.55□□□□□ -1.52
TFA1P36100 COA3YJL062W-A 258 nt5.55□□□□□ -1.52
TFA1P36100 YBR182C-AYBR182C-A 195 nt5.55□□□□□ -1.52
TFA1P36100 DNL4YOR005C 2835 nt5.55□□□□□ -1.52
TFA1P36100 DSE4YNR067C 3354 nt5.55□□□□□ -1.52
TFA1P36100 MYO3YKL129C 3819 nt5.54□□□□□ -1.52
TFA1P36100 INA22YIR024C 651 nt5.54□□□□□ -1.52
TFA1P36100 PIM1YBL022C 3402 nt5.54□□□□□ -1.52
TFA1P36100 CFT2YLR115W 2580 nt5.54□□□□□ -1.52
TFA1P36100 RPL34BYIL052C 366 nt5.53□□□□□ -1.52
TFA1P36100 YMR105W-AYMR105W-A 195 nt5.53□□□□□ -1.52
TFA1P36100 TFC1YBR123C 1950 nt5.53□□□□□ -1.52
TFA1P36100 SSS1YDR086C 243 nt5.52□□□□□ -1.53
TFA1P36100 APC9YLR102C 798 nt5.52□□□□□ -1.53
TFA1P36100 YNR065CYNR065C 3351 nt5.52□□□□□ -1.53
TFA1P36100 CDC27YBL084C 2277 nt5.51□□□□□ -1.53
TFA1P36100 COS111YBR203W 2775 nt5.5□□□□□ -1.53
TFA1P36100 YDR286CYDR286C 345 nt5.5□□□□□ -1.53
TFA1P36100 SEC5YDR166C 2916 nt5.49□□□□□ -1.53
TFA1P36100 GCR1YPL075W 2358 nt5.49□□□□□ -1.53
TFA1P36100 YPR092WYPR092W 306 nt5.49□□□□□ -1.53
TFA1P36100 DBP7YKR024C 2229 nt5.49□□□□□ -1.53
TFA1P36100 tS(AGA)D3tS(AGA)D3 83 nt5.48□□□□□ -1.53
TFA1P36100 snR52snR52 92 nt5.48□□□□□ -1.53
TFA1P36100 PRP6YBR055C 2700 nt5.47□□□□□ -1.53
TFA1P36100 YIR030W-AYIR030W-A 384 nt5.47□□□□□ -1.53
TFA1P36100 MSK1YNL073W 1731 nt5.46□□□□□ -1.54
TFA1P36100 YBR131C-AYBR131C-A 90 nt5.46□□□□□ -1.54
TFA1P36100 PMC1YGL006W 3522 nt5.46□□□□□ -1.54
TFA1P36100 snR74snR74 88 nt5.45□□□□□ -1.54
TFA1P36100 FMP16YDR070C 282 nt5.45□□□□□ -1.54
TFA1P36100 VPS54YDR027C 2670 nt5.44□□□□□ -1.54
TFA1P36100 SMY1YKL079W 1971 nt5.44□□□□□ -1.54
TFA1P36100 MMS22YLR320W 4365 nt5.44□□□□□ -1.54
TFA1P36100 YOR161W-BYOR161W-B 261 nt5.44□□□□□ -1.54
TFA1P36100 SPT21YMR179W 2277 nt5.43□□□□□ -1.54
TFA1P36100 PLC1YPL268W 2610 nt5.43□□□□□ -1.54
TFA1P36100 RPO21YDL140C 5202 nt5.43□□□□□ -1.54
TFA1P36100 SMC3YJL074C 3693 nt5.43□□□□□ -1.54
TFA1P36100 SAF1YBR280C 1914 nt5.42□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 47 ms