Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.36■□□□□ 0.69
RORAP35398 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RORAP35398 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RORAP35398 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.36■□□□□ 0.69
RORAP35398 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.36■□□□□ 0.69
RORAP35398 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.36■□□□□ 0.69
RORAP35398 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 AC092368.3-202ENST00000574180 1591 ntBASIC19.36■□□□□ 0.69
RORAP35398 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.35■□□□□ 0.69
RORAP35398 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RORAP35398 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.35■□□□□ 0.69
RORAP35398 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 RPS2P52-201ENST00000469610 820 ntBASIC19.35■□□□□ 0.69
RORAP35398 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.35■□□□□ 0.69
RORAP35398 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.35■□□□□ 0.69
RORAP35398 AC073648.6-201ENST00000641589 218 ntBASIC19.35■□□□□ 0.69
RORAP35398 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RORAP35398 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.35■□□□□ 0.69
RORAP35398 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
RORAP35398 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.34■□□□□ 0.69
RORAP35398 AC026310.3-201ENST00000625186 2373 ntBASIC19.34■□□□□ 0.69
RORAP35398 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.34■□□□□ 0.69
RORAP35398 FEM1AP4-201ENST00000443167 1987 ntBASIC19.34■□□□□ 0.69
RORAP35398 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RORAP35398 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.34■□□□□ 0.69
RORAP35398 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.34■□□□□ 0.69
RORAP35398 C2orf69P4-201ENST00000565394 541 ntBASIC19.34■□□□□ 0.69
RORAP35398 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.34■□□□□ 0.69
RORAP35398 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.34■□□□□ 0.69
RORAP35398 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RORAP35398 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RORAP35398 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.34■□□□□ 0.69
RORAP35398 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
RORAP35398 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RORAP35398 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RORAP35398 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.33■□□□□ 0.69
RORAP35398 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RORAP35398 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RORAP35398 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RORAP35398 PGM5P4-201ENST00000421970 445 ntBASIC19.33■□□□□ 0.68
RORAP35398 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.33■□□□□ 0.68
RORAP35398 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.33■□□□□ 0.68
RORAP35398 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.33■□□□□ 0.68
RORAP35398 UNC93B4-201ENST00000505679 747 ntBASIC19.33■□□□□ 0.68
RORAP35398 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.33■□□□□ 0.68
RORAP35398 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RORAP35398 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RORAP35398 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RORAP35398 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RORAP35398 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.32■□□□□ 0.68
RORAP35398 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.32■□□□□ 0.68
RORAP35398 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.32■□□□□ 0.68
RORAP35398 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.32■□□□□ 0.68
RORAP35398 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.32■□□□□ 0.68
RORAP35398 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RORAP35398 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RORAP35398 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.32■□□□□ 0.68
RORAP35398 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RORAP35398 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
RORAP35398 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms