Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LSP1P33241 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.43■□□□□ 0.86
LSP1P33241 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.43■□□□□ 0.86
LSP1P33241 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSP1P33241 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LSP1P33241 AC005332.8-201ENST00000622750 2735 ntBASIC20.42■□□□□ 0.86
LSP1P33241 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.42■□□□□ 0.86
LSP1P33241 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 TREX1-205ENST00000625293 1783 ntBASIC20.42■□□□□ 0.86
LSP1P33241 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.42■□□□□ 0.86
LSP1P33241 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.42■□□□□ 0.86
LSP1P33241 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
LSP1P33241 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.42■□□□□ 0.86
LSP1P33241 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.42■□□□□ 0.86
LSP1P33241 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.42■□□□□ 0.86
LSP1P33241 AL049812.1-201ENST00000432563 2267 ntBASIC20.42■□□□□ 0.86
LSP1P33241 TMEM179-206ENST00000616017 1645 ntBASIC20.42■□□□□ 0.86
LSP1P33241 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSP1P33241 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LSP1P33241 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LSP1P33241 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.41■□□□□ 0.86
LSP1P33241 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LSP1P33241 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LSP1P33241 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.41■□□□□ 0.86
LSP1P33241 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 AC006455.2-201ENST00000429931 906 ntBASIC20.41■□□□□ 0.86
LSP1P33241 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LSP1P33241 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.41■□□□□ 0.86
LSP1P33241 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LSP1P33241 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.41■□□□□ 0.86
LSP1P33241 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSP1P33241 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LSP1P33241 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
LSP1P33241 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LSP1P33241 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LSP1P33241 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LSP1P33241 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LSP1P33241 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LSP1P33241 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.4■□□□□ 0.86
LSP1P33241 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
LSP1P33241 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.4■□□□□ 0.86
LSP1P33241 RARRES2P1-201ENST00000474487 481 ntBASIC20.4■□□□□ 0.86
LSP1P33241 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 AC103724.3-201ENST00000564481 992 ntBASIC20.4■□□□□ 0.86
LSP1P33241 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.4■□□□□ 0.86
LSP1P33241 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LSP1P33241 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSP1P33241 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.39■□□□□ 0.86
LSP1P33241 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LSP1P33241 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LSP1P33241 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
LSP1P33241 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSP1P33241 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.39■□□□□ 0.86
LSP1P33241 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LSP1P33241 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSP1P33241 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSP1P33241 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSP1P33241 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSP1P33241 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LSP1P33241 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.39■□□□□ 0.85
LSP1P33241 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.39■□□□□ 0.85
LSP1P33241 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.39■□□□□ 0.85
LSP1P33241 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSP1P33241 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.39■□□□□ 0.85
LSP1P33241 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.39■□□□□ 0.85
LSP1P33241 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.39■□□□□ 0.85
LSP1P33241 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms