Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCND1P24385 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.42■□□□□ 0.86
CCND1P24385 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.42■□□□□ 0.86
CCND1P24385 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CCND1P24385 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.42■□□□□ 0.86
CCND1P24385 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.42■□□□□ 0.86
CCND1P24385 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.42■□□□□ 0.86
CCND1P24385 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 MIR6821-201ENST00000617625 74 ntBASIC20.42■□□□□ 0.86
CCND1P24385 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCND1P24385 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCND1P24385 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCND1P24385 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCND1P24385 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.41■□□□□ 0.86
CCND1P24385 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.41■□□□□ 0.86
CCND1P24385 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.41■□□□□ 0.86
CCND1P24385 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.41■□□□□ 0.86
CCND1P24385 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.41■□□□□ 0.86
CCND1P24385 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.41■□□□□ 0.86
CCND1P24385 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.41■□□□□ 0.86
CCND1P24385 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.41■□□□□ 0.86
CCND1P24385 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CCND1P24385 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCND1P24385 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.41■□□□□ 0.86
CCND1P24385 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
CCND1P24385 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCND1P24385 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.4■□□□□ 0.86
CCND1P24385 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.4■□□□□ 0.86
CCND1P24385 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCND1P24385 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.4■□□□□ 0.86
CCND1P24385 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.4■□□□□ 0.86
CCND1P24385 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CCND1P24385 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCND1P24385 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCND1P24385 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.39■□□□□ 0.86
CCND1P24385 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.39■□□□□ 0.86
CCND1P24385 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCND1P24385 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCND1P24385 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCND1P24385 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCND1P24385 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.39■□□□□ 0.85
CCND1P24385 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCND1P24385 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.39■□□□□ 0.85
CCND1P24385 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCND1P24385 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCND1P24385 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.38■□□□□ 0.85
CCND1P24385 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.38■□□□□ 0.85
CCND1P24385 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.38■□□□□ 0.85
CCND1P24385 AC034268.1-201ENST00000441047 882 ntBASIC20.38■□□□□ 0.85
CCND1P24385 AC138907.5-202ENST00000569484 235 ntBASIC20.38■□□□□ 0.85
CCND1P24385 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.38■□□□□ 0.85
CCND1P24385 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms