Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y1P22090 PKD1P6-201ENST00000343738 4769 ntBASIC18.7■□□□□ 0.58
RPS4Y1P22090 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y1P22090 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 MIR5787-201ENST00000611784 55 ntBASIC18.69■□□□□ 0.58
RPS4Y1P22090 AL356652.1-201ENST00000615962 565 ntBASIC18.69■□□□□ 0.58
RPS4Y1P22090 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4Y1P22090 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y1P22090 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 AC068338.2-201ENST00000563278 1430 ntBASIC18.68■□□□□ 0.58
RPS4Y1P22090 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y1P22090 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.68■□□□□ 0.58
RPS4Y1P22090 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 SMG8-203ENST00000578922 2178 ntBASIC18.67■□□□□ 0.58
RPS4Y1P22090 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 RARRES2P4-201ENST00000514074 484 ntBASIC18.67■□□□□ 0.58
RPS4Y1P22090 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 AC011767.1-201ENST00000617410 1153 ntBASIC18.67■□□□□ 0.58
RPS4Y1P22090 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.67■□□□□ 0.58
RPS4Y1P22090 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS4Y1P22090 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS4Y1P22090 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS4Y1P22090 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RPS4Y1P22090 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RPS4Y1P22090 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 AC100791.3-201ENST00000617619 330 ntBASIC18.66■□□□□ 0.58
RPS4Y1P22090 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RPS4Y1P22090 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS4Y1P22090 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.66■□□□□ 0.58
RPS4Y1P22090 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPS4Y1P22090 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RPS4Y1P22090 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS4Y1P22090 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms