Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
BCKDHBP21953 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.25■□□□□ 0.83
BCKDHBP21953 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.25■□□□□ 0.83
BCKDHBP21953 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.25■□□□□ 0.83
BCKDHBP21953 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.24■□□□□ 0.83
BCKDHBP21953 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.24■□□□□ 0.83
BCKDHBP21953 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.24■□□□□ 0.83
BCKDHBP21953 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.24■□□□□ 0.83
BCKDHBP21953 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.24■□□□□ 0.83
BCKDHBP21953 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
BCKDHBP21953 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.24■□□□□ 0.83
BCKDHBP21953 AP003071.4-201ENST00000562276 1284 ntBASIC20.24■□□□□ 0.83
BCKDHBP21953 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.24■□□□□ 0.83
BCKDHBP21953 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.24■□□□□ 0.83
BCKDHBP21953 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.24■□□□□ 0.83
BCKDHBP21953 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.24■□□□□ 0.83
BCKDHBP21953 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
BCKDHBP21953 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BCKDHBP21953 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.23■□□□□ 0.83
BCKDHBP21953 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.23■□□□□ 0.83
BCKDHBP21953 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.23■□□□□ 0.83
BCKDHBP21953 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
BCKDHBP21953 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.23■□□□□ 0.83
BCKDHBP21953 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
BCKDHBP21953 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BCKDHBP21953 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
BCKDHBP21953 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHBP21953 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.22■□□□□ 0.83
BCKDHBP21953 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHBP21953 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHBP21953 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BCKDHBP21953 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.22■□□□□ 0.83
BCKDHBP21953 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.22■□□□□ 0.83
BCKDHBP21953 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.22■□□□□ 0.83
BCKDHBP21953 AL445228.2-201ENST00000605589 952 ntBASIC20.22■□□□□ 0.83
BCKDHBP21953 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
BCKDHBP21953 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHBP21953 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHBP21953 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BCKDHBP21953 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
BCKDHBP21953 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.21■□□□□ 0.83
BCKDHBP21953 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.21■□□□□ 0.83
BCKDHBP21953 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.21■□□□□ 0.83
BCKDHBP21953 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.21■□□□□ 0.83
BCKDHBP21953 RN7SL850P-201ENST00000579959 291 ntBASIC20.21■□□□□ 0.83
BCKDHBP21953 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.21■□□□□ 0.83
BCKDHBP21953 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.21■□□□□ 0.83
BCKDHBP21953 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.21■□□□□ 0.83
BCKDHBP21953 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BCKDHBP21953 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.21■□□□□ 0.83
BCKDHBP21953 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms