Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 MET5YJR137C 4329 nt3.05□□□□□ -1.92
HCA4P20448 PUF6YDR496C 1971 nt3.05□□□□□ -1.92
HCA4P20448 SNX41YDR425W 1878 nt3.05□□□□□ -1.92
HCA4P20448 YHR078WYHR078W 1659 nt3.05□□□□□ -1.92
HCA4P20448 YER188C-AYER188C-A 300 nt3.05□□□□□ -1.92
HCA4P20448 GPI14YJR013W 1212 nt3.05□□□□□ -1.92
HCA4P20448 YBL008W-AYBL008W-A 240 nt3.05□□□□□ -1.92
HCA4P20448 YPL229WYPL229W 621 nt3.05□□□□□ -1.92
HCA4P20448 RIF1YBR275C 5751 nt3.05□□□□□ -1.92
HCA4P20448 YPL150WYPL150W 2706 nt3.05□□□□□ -1.92
HCA4P20448 AXL1YPR122W 3627 nt3.05□□□□□ -1.92
HCA4P20448 YDR406W-AYDR406W-A 246 nt3.04□□□□□ -1.92
HCA4P20448 YJR140W-AYJR140W-A 150 nt3.04□□□□□ -1.92
HCA4P20448 YLR458WYLR458W 381 nt3.04□□□□□ -1.92
HCA4P20448 ESF2YNR054C 951 nt3.04□□□□□ -1.92
HCA4P20448 ECM25YJL201W 1800 nt3.04□□□□□ -1.92
HCA4P20448 YIL166CYIL166C 1629 nt3.04□□□□□ -1.92
HCA4P20448 TCB2YNL087W 3537 nt3.03□□□□□ -1.92
HCA4P20448 CDC36YDL165W 576 nt3.03□□□□□ -1.92
HCA4P20448 ATP8Q0080 147 nt3.03□□□□□ -1.92
HCA4P20448 URM1YIL008W 300 nt3.03□□□□□ -1.92
HCA4P20448 tW(CCA)G1tW(CCA)G1 72 nt3.03□□□□□ -1.92
HCA4P20448 YIL058WYIL058W 285 nt3.03□□□□□ -1.92
HCA4P20448 tW(CCA)G2tW(CCA)G2 72 nt3.03□□□□□ -1.92
HCA4P20448 tW(CCA)JtW(CCA)J 72 nt3.03□□□□□ -1.92
HCA4P20448 tW(CCA)KtW(CCA)K 72 nt3.03□□□□□ -1.92
HCA4P20448 tW(CCA)MtW(CCA)M 72 nt3.03□□□□□ -1.92
HCA4P20448 tW(CCA)PtW(CCA)P 72 nt3.03□□□□□ -1.92
HCA4P20448 RPS22BYLR367W 393 nt3.03□□□□□ -1.92
HCA4P20448 RPL20AYMR242C 519 nt3.03□□□□□ -1.92
HCA4P20448 YBR085C-AYBR085C-A 258 nt3.03□□□□□ -1.92
HCA4P20448 TRM2YKR056W 1920 nt3.03□□□□□ -1.92
HCA4P20448 PAC1YOR269W 1485 nt3.03□□□□□ -1.93
HCA4P20448 VPS64YDR200C 1815 nt3.03□□□□□ -1.93
HCA4P20448 YDR169C-AYDR169C-A 150 nt3.02□□□□□ -1.93
HCA4P20448 YER189WYER189W 369 nt3.02□□□□□ -1.93
HCA4P20448 YGL041CYGL041C 204 nt3.02□□□□□ -1.93
HCA4P20448 YIL174WYIL174W 228 nt3.02□□□□□ -1.93
HCA4P20448 PAM16YJL104W 450 nt3.02□□□□□ -1.93
HCA4P20448 YJL222W-AYJL222W-A 228 nt3.02□□□□□ -1.93
HCA4P20448 RPL26AYLR344W 384 nt3.02□□□□□ -1.93
HCA4P20448 snR51snR51 107 nt3.02□□□□□ -1.93
HCA4P20448 CDC20YGL116W 1833 nt3.02□□□□□ -1.93
HCA4P20448 ECM5YMR176W 4236 nt3.01□□□□□ -1.93
HCA4P20448 HYR1YIR037W 492 nt3.01□□□□□ -1.93
HCA4P20448 PSY1YKL076C 384 nt3.01□□□□□ -1.93
HCA4P20448 RPL9BYNL067W 576 nt3.01□□□□□ -1.93
HCA4P20448 FRE2YKL220C 2136 nt3□□□□□ -1.93
HCA4P20448 TMA10YLR327C 261 nt3□□□□□ -1.93
HCA4P20448 YCL023CYCL023C 348 nt3□□□□□ -1.93
HCA4P20448 PUF4YGL014W 2667 nt3□□□□□ -1.93
HCA4P20448 PSY2YNL201C 2577 nt3□□□□□ -1.93
HCA4P20448 BNR1YIL159W 4128 nt3□□□□□ -1.93
HCA4P20448 SLN1YIL147C 3663 nt2.99□□□□□ -1.93
HCA4P20448 DNA2YHR164C 4569 nt2.99□□□□□ -1.93
HCA4P20448 PNC1YGL037C 651 nt2.99□□□□□ -1.93
HCA4P20448 ALG13YGL047W 609 nt2.99□□□□□ -1.93
HCA4P20448 APQ12YIL040W 417 nt2.99□□□□□ -1.93
HCA4P20448 YOR050CYOR050C 348 nt2.99□□□□□ -1.93
HCA4P20448 PRP8YHR165C 7242 nt2.99□□□□□ -1.93
HCA4P20448 RSN1YMR266W 2862 nt2.99□□□□□ -1.93
HCA4P20448 CYR1YJL005W 6081 nt2.99□□□□□ -1.93
HCA4P20448 CAF120YNL278W 3183 nt2.98□□□□□ -1.93
HCA4P20448 PSO2YMR137C 1986 nt2.98□□□□□ -1.93
HCA4P20448 RSE1YML049C 4086 nt2.98□□□□□ -1.93
HCA4P20448 WIP1YDR374W-A 270 nt2.98□□□□□ -1.93
HCA4P20448 YJL182CYJL182C 318 nt2.98□□□□□ -1.93
HCA4P20448 YKL111CYKL111C 336 nt2.98□□□□□ -1.93
HCA4P20448 YLR466C-BYLR466C-B 117 nt2.98□□□□□ -1.93
HCA4P20448 LEU3YLR451W 2661 nt2.98□□□□□ -1.93
HCA4P20448 ESL2YKR096W 3588 nt2.98□□□□□ -1.93
HCA4P20448 BUB1YGR188C 3066 nt2.98□□□□□ -1.93
HCA4P20448 NUP120YKL057C 3114 nt2.97□□□□□ -1.93
HCA4P20448 SSE1YPL106C 2082 nt2.97□□□□□ -1.93
HCA4P20448 RKM1YPL208W 1752 nt2.97□□□□□ -1.93
HCA4P20448 LCL2YLR104W 396 nt2.97□□□□□ -1.93
HCA4P20448 NAB3YPL190C 2409 nt2.97□□□□□ -1.93
HCA4P20448 YSW1YBR148W 1830 nt2.96□□□□□ -1.94
HCA4P20448 AI2Q0055 2565 nt2.96□□□□□ -1.94
HCA4P20448 SSY1YDR160W 2559 nt2.96□□□□□ -1.94
HCA4P20448 YDL007C-AYDL007C-A 258 nt2.96□□□□□ -1.94
HCA4P20448 snR76snR76 109 nt2.96□□□□□ -1.94
HCA4P20448 YEL020C-BYEL020C-B 198 nt2.96□□□□□ -1.94
HCA4P20448 ISD11YER048W-A 285 nt2.96□□□□□ -1.94
HCA4P20448 YHR086W-AYHR086W-A 162 nt2.96□□□□□ -1.94
HCA4P20448 YMR307C-AYMR307C-A 195 nt2.96□□□□□ -1.94
HCA4P20448 BRO1YPL084W 2535 nt2.96□□□□□ -1.94
HCA4P20448 PCF11YDR228C 1881 nt2.96□□□□□ -1.94
HCA4P20448 PFF1YBR074W 2931 nt2.96□□□□□ -1.94
HCA4P20448 RGA2YDR379W 3030 nt2.95□□□□□ -1.94
HCA4P20448 YDL062WYDL062W 426 nt2.95□□□□□ -1.94
HCA4P20448 RPL35AYDL191W 363 nt2.95□□□□□ -1.94
HCA4P20448 RPL14BYHL001W 417 nt2.95□□□□□ -1.94
HCA4P20448 tT(UGU)Q1tT(UGU)Q1 76 nt2.95□□□□□ -1.94
HCA4P20448 YIL066W-AYIL066W-A 444 nt2.95□□□□□ -1.94
HCA4P20448 TIM8YJR135W-A 264 nt2.95□□□□□ -1.94
HCA4P20448 ABF2YMR072W 552 nt2.95□□□□□ -1.94
HCA4P20448 RGM1YMR182C 636 nt2.95□□□□□ -1.94
HCA4P20448 SIN3YOL004W 4611 nt2.95□□□□□ -1.94
HCA4P20448 NFT1YKR103W 3657 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 100.1 ms