Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.78■□□□□ 0.6
PRKCAP17252 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.78■□□□□ 0.6
PRKCAP17252 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.78■□□□□ 0.6
PRKCAP17252 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.78■□□□□ 0.6
PRKCAP17252 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.78■□□□□ 0.6
PRKCAP17252 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.78■□□□□ 0.6
PRKCAP17252 DUX4L16-201ENST00000555130 1264 ntBASIC18.78■□□□□ 0.6
PRKCAP17252 AL137784.2-201ENST00000607332 1000 ntBASIC18.78■□□□□ 0.6
PRKCAP17252 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.78■□□□□ 0.6
PRKCAP17252 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRKCAP17252 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKCAP17252 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRKCAP17252 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRKCAP17252 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRKCAP17252 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRKCAP17252 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRKCAP17252 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.77■□□□□ 0.6
PRKCAP17252 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.77■□□□□ 0.6
PRKCAP17252 AC013268.1-206ENST00000638368 961 ntBASIC18.77■□□□□ 0.6
PRKCAP17252 AC112229.1-201ENST00000639295 961 ntBASIC18.77■□□□□ 0.6
PRKCAP17252 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRKCAP17252 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRKCAP17252 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PRKCAP17252 AC121338.2-201ENST00000622535 1744 ntBASIC18.77■□□□□ 0.59
PRKCAP17252 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PRKCAP17252 AC026471.1-201ENST00000564629 3026 ntBASIC18.76■□□□□ 0.59
PRKCAP17252 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PRKCAP17252 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.76■□□□□ 0.59
PRKCAP17252 AC004911.1-201ENST00000416316 871 ntBASIC18.76■□□□□ 0.59
PRKCAP17252 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRKCAP17252 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.76■□□□□ 0.59
PRKCAP17252 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.76■□□□□ 0.59
PRKCAP17252 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.76■□□□□ 0.59
PRKCAP17252 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
PRKCAP17252 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PRKCAP17252 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.76■□□□□ 0.59
PRKCAP17252 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRKCAP17252 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.76■□□□□ 0.59
PRKCAP17252 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PRKCAP17252 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PRKCAP17252 AC011484.1-201ENST00000377652 1995 ntBASIC18.75■□□□□ 0.59
PRKCAP17252 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.75■□□□□ 0.59
PRKCAP17252 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
PRKCAP17252 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.75■□□□□ 0.59
PRKCAP17252 AC007322.4-201ENST00000509611 723 ntBASIC18.75■□□□□ 0.59
PRKCAP17252 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.75■□□□□ 0.59
PRKCAP17252 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 PLK5-205ENST00000642079 1969 ntBASIC18.75■□□□□ 0.59
PRKCAP17252 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRKCAP17252 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PRKCAP17252 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PRKCAP17252 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 AC116050.2-201ENST00000612102 1779 ntBASIC18.74■□□□□ 0.59
PRKCAP17252 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PRKCAP17252 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 CNN2P6-201ENST00000439038 900 ntBASIC18.74■□□□□ 0.59
PRKCAP17252 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.74■□□□□ 0.59
PRKCAP17252 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms