Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.34■■□□□ 1.33
COL11A1P12107 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A1P12107 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A1P12107 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.34■■□□□ 1.33
COL11A1P12107 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.34■■□□□ 1.33
COL11A1P12107 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.34■■□□□ 1.33
COL11A1P12107 FBXW4P1-201ENST00000426721 2239 ntBASIC23.34■■□□□ 1.33
COL11A1P12107 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A1P12107 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A1P12107 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.34■■□□□ 1.33
COL11A1P12107 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A1P12107 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A1P12107 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
COL11A1P12107 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.33■■□□□ 1.33
COL11A1P12107 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A1P12107 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
COL11A1P12107 AC133561.1-201ENST00000568600 2415 ntBASIC23.33■■□□□ 1.33
COL11A1P12107 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A1P12107 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.33■■□□□ 1.33
COL11A1P12107 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A1P12107 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
COL11A1P12107 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A1P12107 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.33■■□□□ 1.33
COL11A1P12107 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A1P12107 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A1P12107 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
COL11A1P12107 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.33■■□□□ 1.32
COL11A1P12107 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
COL11A1P12107 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A1P12107 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
COL11A1P12107 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A1P12107 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.33■■□□□ 1.32
COL11A1P12107 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.33■■□□□ 1.32
COL11A1P12107 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.33■■□□□ 1.32
COL11A1P12107 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
COL11A1P12107 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A1P12107 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A1P12107 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A1P12107 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.33■■□□□ 1.32
COL11A1P12107 AC124283.5-201ENST00000624661 1809 ntBASIC23.33■■□□□ 1.32
COL11A1P12107 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.32■■□□□ 1.32
COL11A1P12107 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.32■■□□□ 1.32
COL11A1P12107 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 EP400NL-214ENST00000641289 2402 ntBASIC23.32■■□□□ 1.32
COL11A1P12107 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
COL11A1P12107 TSPY7P-201ENST00000431358 1114 ntBASIC23.32■■□□□ 1.32
COL11A1P12107 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
COL11A1P12107 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.32■■□□□ 1.32
COL11A1P12107 PTBP1P-201ENST00000554374 1601 ntBASIC23.32■■□□□ 1.32
COL11A1P12107 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A1P12107 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.31■■□□□ 1.32
COL11A1P12107 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
COL11A1P12107 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.31■■□□□ 1.32
COL11A1P12107 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A1P12107 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.31■■□□□ 1.32
COL11A1P12107 AL049637.2-201ENST00000641778 930 ntBASIC23.31■■□□□ 1.32
COL11A1P12107 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A1P12107 KRT8P36-201ENST00000489121 1440 ntBASIC23.31■■□□□ 1.32
COL11A1P12107 AC011484.1-201ENST00000377652 1995 ntBASIC23.31■■□□□ 1.32
COL11A1P12107 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A1P12107 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.31■■□□□ 1.32
COL11A1P12107 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A1P12107 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A1P12107 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.31■■□□□ 1.32
COL11A1P12107 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.31■■□□□ 1.32
COL11A1P12107 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.31■■□□□ 1.32
COL11A1P12107 AC073912.3-201ENST00000624414 853 ntBASIC23.31■■□□□ 1.32
COL11A1P12107 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.3■■□□□ 1.32
COL11A1P12107 AL390719.1-204ENST00000412397 1219 ntBASIC23.3■■□□□ 1.32
COL11A1P12107 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.3■■□□□ 1.32
COL11A1P12107 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL11A1P12107 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
COL11A1P12107 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A1P12107 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.29■■□□□ 1.32
COL11A1P12107 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A1P12107 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.29■■□□□ 1.32
COL11A1P12107 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A1P12107 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A1P12107 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
COL11A1P12107 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.29■■□□□ 1.32
COL11A1P12107 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms