Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.79■□□□□ 0.76
PCNAP12004 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCNAP12004 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCNAP12004 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCNAP12004 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCNAP12004 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
PCNAP12004 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PCNAP12004 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCNAP12004 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCNAP12004 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.78■□□□□ 0.76
PCNAP12004 AC016769.1-201ENST00000409132 1010 ntBASIC19.78■□□□□ 0.76
PCNAP12004 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.78■□□□□ 0.76
PCNAP12004 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PCNAP12004 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.78■□□□□ 0.76
PCNAP12004 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.78■□□□□ 0.76
PCNAP12004 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.78■□□□□ 0.76
PCNAP12004 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.78■□□□□ 0.76
PCNAP12004 AC243732.1-201ENST00000612648 864 ntBASIC19.78■□□□□ 0.76
PCNAP12004 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.78■□□□□ 0.76
PCNAP12004 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCNAP12004 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCNAP12004 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCNAP12004 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
PCNAP12004 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PCNAP12004 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
PCNAP12004 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCNAP12004 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCNAP12004 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCNAP12004 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCNAP12004 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCNAP12004 AC091799.1-201ENST00000422823 811 ntBASIC19.77■□□□□ 0.76
PCNAP12004 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.77■□□□□ 0.76
PCNAP12004 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCNAP12004 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCNAP12004 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.77■□□□□ 0.76
PCNAP12004 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.77■□□□□ 0.76
PCNAP12004 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PCNAP12004 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PCNAP12004 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.76■□□□□ 0.75
PCNAP12004 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
PCNAP12004 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.76■□□□□ 0.75
PCNAP12004 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.76■□□□□ 0.75
PCNAP12004 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.76■□□□□ 0.75
PCNAP12004 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCNAP12004 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PCNAP12004 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCNAP12004 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCNAP12004 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCNAP12004 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.76■□□□□ 0.75
PCNAP12004 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCNAP12004 AL162430.1-201ENST00000480705 870 ntBASIC19.76■□□□□ 0.75
PCNAP12004 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCNAP12004 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCNAP12004 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCNAP12004 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCNAP12004 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PCNAP12004 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.75■□□□□ 0.75
PCNAP12004 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCNAP12004 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PCNAP12004 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCNAP12004 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.75■□□□□ 0.75
PCNAP12004 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.75■□□□□ 0.75
PCNAP12004 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCNAP12004 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCNAP12004 AIRN-201ENST00000601203 4374 ntBASIC19.74■□□□□ 0.75
PCNAP12004 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.74■□□□□ 0.75
PCNAP12004 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCNAP12004 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.74■□□□□ 0.75
PCNAP12004 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCNAP12004 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCNAP12004 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PCNAP12004 AC073314.1-201ENST00000568729 2216 ntBASIC19.74■□□□□ 0.75
PCNAP12004 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PCNAP12004 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCNAP12004 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms