Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SP9P0CG40 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.28■□□□□ 0.84
SP9P0CG40 LIN28AP1-201ENST00000429574 405 ntBASIC20.28■□□□□ 0.84
SP9P0CG40 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.28■□□□□ 0.84
SP9P0CG40 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.28■□□□□ 0.84
SP9P0CG40 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.28■□□□□ 0.84
SP9P0CG40 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.28■□□□□ 0.84
SP9P0CG40 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 AC004264.1-201ENST00000608354 794 ntBASIC20.28■□□□□ 0.84
SP9P0CG40 AC091076.1-201ENST00000610741 619 ntBASIC20.28■□□□□ 0.84
SP9P0CG40 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.28■□□□□ 0.84
SP9P0CG40 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SP9P0CG40 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.27■□□□□ 0.84
SP9P0CG40 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SP9P0CG40 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.27■□□□□ 0.84
SP9P0CG40 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.27■□□□□ 0.84
SP9P0CG40 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.27■□□□□ 0.84
SP9P0CG40 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.27■□□□□ 0.84
SP9P0CG40 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.27■□□□□ 0.84
SP9P0CG40 AL358472.4-201ENST00000633140 710 ntBASIC20.27■□□□□ 0.84
SP9P0CG40 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SP9P0CG40 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.27■□□□□ 0.83
SP9P0CG40 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SP9P0CG40 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SP9P0CG40 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.27■□□□□ 0.83
SP9P0CG40 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SP9P0CG40 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SP9P0CG40 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.26■□□□□ 0.83
SP9P0CG40 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.26■□□□□ 0.83
SP9P0CG40 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.26■□□□□ 0.83
SP9P0CG40 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SP9P0CG40 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SP9P0CG40 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.25■□□□□ 0.83
SP9P0CG40 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SP9P0CG40 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SP9P0CG40 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SP9P0CG40 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
SP9P0CG40 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.25■□□□□ 0.83
SP9P0CG40 ATP5G1P1-201ENST00000448724 379 ntBASIC20.25■□□□□ 0.83
SP9P0CG40 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.25■□□□□ 0.83
SP9P0CG40 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SP9P0CG40 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.25■□□□□ 0.83
SP9P0CG40 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.25■□□□□ 0.83
SP9P0CG40 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.25■□□□□ 0.83
SP9P0CG40 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.25■□□□□ 0.83
SP9P0CG40 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.25■□□□□ 0.83
SP9P0CG40 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SP9P0CG40 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SP9P0CG40 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.25■□□□□ 0.83
SP9P0CG40 CR392000.1-201ENST00000624770 1228 ntBASIC20.25■□□□□ 0.83
SP9P0CG40 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SP9P0CG40 AC124283.5-201ENST00000624661 1809 ntBASIC20.25■□□□□ 0.83
SP9P0CG40 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SP9P0CG40 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.24■□□□□ 0.83
SP9P0CG40 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.24■□□□□ 0.83
SP9P0CG40 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.24■□□□□ 0.83
SP9P0CG40 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.24■□□□□ 0.83
SP9P0CG40 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 KRT126P-201ENST00000549467 1181 ntBASIC20.24■□□□□ 0.83
SP9P0CG40 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
SP9P0CG40 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SP9P0CG40 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SP9P0CG40 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.24■□□□□ 0.83
SP9P0CG40 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SP9P0CG40 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SP9P0CG40 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms