Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ERCC1P07992 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18■□□□□ 0.47
ERCC1P07992 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18■□□□□ 0.47
ERCC1P07992 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC1P07992 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.99■□□□□ 0.47
ERCC1P07992 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ERCC1P07992 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.99■□□□□ 0.47
ERCC1P07992 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ERCC1P07992 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.99■□□□□ 0.47
ERCC1P07992 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
ERCC1P07992 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC1P07992 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC1P07992 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ERCC1P07992 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ERCC1P07992 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.99■□□□□ 0.47
ERCC1P07992 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.99■□□□□ 0.47
ERCC1P07992 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ERCC1P07992 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.99■□□□□ 0.47
ERCC1P07992 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC1P07992 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
ERCC1P07992 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ERCC1P07992 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
ERCC1P07992 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
ERCC1P07992 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC1P07992 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ERCC1P07992 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ERCC1P07992 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ERCC1P07992 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 HLA-L-209ENST00000420110 1011 ntBASIC17.98■□□□□ 0.47
ERCC1P07992 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 SLC7A5P1-201ENST00000568957 537 ntBASIC17.98■□□□□ 0.47
ERCC1P07992 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC1P07992 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC1P07992 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
ERCC1P07992 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC1P07992 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC1P07992 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ERCC1P07992 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ERCC1P07992 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ERCC1P07992 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC1P07992 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
ERCC1P07992 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 MIR663A-201ENST00000385250 93 ntBASIC17.97■□□□□ 0.47
ERCC1P07992 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC1P07992 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.97■□□□□ 0.47
ERCC1P07992 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC1P07992 RAP2CP1-201ENST00000605103 478 ntBASIC17.97■□□□□ 0.47
ERCC1P07992 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC1P07992 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC1P07992 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC1P07992 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC1P07992 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ERCC1P07992 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC1P07992 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC1P07992 AC010536.3-201ENST00000620306 533 ntBASIC17.96■□□□□ 0.47
ERCC1P07992 AC013268.1-206ENST00000638368 961 ntBASIC17.96■□□□□ 0.47
ERCC1P07992 AC112229.1-201ENST00000639295 961 ntBASIC17.96■□□□□ 0.47
ERCC1P07992 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ERCC1P07992 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ERCC1P07992 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ERCC1P07992 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC1P07992 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC1P07992 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms