Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RB1P06400 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RB1P06400 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RB1P06400 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RB1P06400 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RB1P06400 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RB1P06400 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.68■■□□□ 1.06
RB1P06400 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RB1P06400 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.67■■□□□ 1.06
RB1P06400 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.67■■□□□ 1.06
RB1P06400 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RB1P06400 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.67■■□□□ 1.06
RB1P06400 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RB1P06400 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.67■■□□□ 1.06
RB1P06400 KRT18P35-201ENST00000510488 1269 ntBASIC21.67■■□□□ 1.06
RB1P06400 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.67■■□□□ 1.06
RB1P06400 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.67■■□□□ 1.06
RB1P06400 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.67■■□□□ 1.06
RB1P06400 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.67■■□□□ 1.06
RB1P06400 AL590326.2-201ENST00000625139 305 ntBASIC21.67■■□□□ 1.06
RB1P06400 AC092865.7-201ENST00000641832 219 ntBASIC21.67■■□□□ 1.06
RB1P06400 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RB1P06400 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RB1P06400 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RB1P06400 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RB1P06400 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RB1P06400 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RB1P06400 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.66■■□□□ 1.06
RB1P06400 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.66■■□□□ 1.06
RB1P06400 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.66■■□□□ 1.06
RB1P06400 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 AC023632.3-201ENST00000521633 145 ntBASIC21.66■■□□□ 1.06
RB1P06400 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.66■■□□□ 1.06
RB1P06400 AC145285.6-201ENST00000604632 637 ntBASIC21.66■■□□□ 1.06
RB1P06400 AC073195.1-201ENST00000607241 877 ntBASIC21.66■■□□□ 1.06
RB1P06400 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.66■■□□□ 1.06
RB1P06400 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RB1P06400 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.66■■□□□ 1.06
RB1P06400 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.65■■□□□ 1.06
RB1P06400 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.65■■□□□ 1.06
RB1P06400 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.65■■□□□ 1.06
RB1P06400 NBPF21P-201ENST00000425093 1451 ntBASIC21.65■■□□□ 1.06
RB1P06400 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RB1P06400 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
RB1P06400 ARMC10P1-201ENST00000313754 855 ntBASIC21.65■■□□□ 1.06
RB1P06400 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.65■■□□□ 1.06
RB1P06400 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.65■■□□□ 1.06
RB1P06400 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.65■■□□□ 1.06
RB1P06400 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.65■■□□□ 1.06
RB1P06400 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.65■■□□□ 1.06
RB1P06400 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RB1P06400 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.65■■□□□ 1.06
RB1P06400 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RB1P06400 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
RB1P06400 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RB1P06400 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RB1P06400 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RB1P06400 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RB1P06400 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RB1P06400 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.64■■□□□ 1.05
RB1P06400 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
RB1P06400 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.64■■□□□ 1.05
RB1P06400 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.64■■□□□ 1.05
RB1P06400 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RB1P06400 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RB1P06400 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.64■■□□□ 1.05
RB1P06400 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.64■■□□□ 1.05
RB1P06400 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.64■■□□□ 1.05
RB1P06400 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.64■■□□□ 1.05
RB1P06400 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RB1P06400 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RB1P06400 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RB1P06400 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.63■■□□□ 1.05
RB1P06400 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RB1P06400 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RB1P06400 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.63■■□□□ 1.05
RB1P06400 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 FAM197Y1-201ENST00000421178 764 ntBASIC21.63■■□□□ 1.05
RB1P06400 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RB1P06400 AL049597.2-201ENST00000565575 961 ntBASIC21.63■■□□□ 1.05
RB1P06400 AC005363.2-201ENST00000618631 242 ntBASIC21.63■■□□□ 1.05
RB1P06400 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.63■■□□□ 1.05
RB1P06400 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.63■■□□□ 1.05
RB1P06400 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms