Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CD3DP04234 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 AC005332.7-201ENST00000614046 2005 ntBASIC17.25■□□□□ 0.35
CD3DP04234 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 SERBP1P1-201ENST00000396021 1160 ntBASIC17.25■□□□□ 0.35
CD3DP04234 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 AC136469.2-201ENST00000623944 1028 ntBASIC17.25■□□□□ 0.35
CD3DP04234 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.25■□□□□ 0.35
CD3DP04234 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.25■□□□□ 0.35
CD3DP04234 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD3DP04234 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 AC009237.3-201ENST00000393279 1427 ntBASIC17.24■□□□□ 0.35
CD3DP04234 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.24■□□□□ 0.35
CD3DP04234 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.24■□□□□ 0.35
CD3DP04234 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD3DP04234 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CD3DP04234 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CD3DP04234 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.23■□□□□ 0.35
CD3DP04234 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.23■□□□□ 0.35
CD3DP04234 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CD3DP04234 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CD3DP04234 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.23■□□□□ 0.35
CD3DP04234 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.23■□□□□ 0.35
CD3DP04234 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.23■□□□□ 0.35
CD3DP04234 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.23■□□□□ 0.35
CD3DP04234 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD3DP04234 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.22■□□□□ 0.35
CD3DP04234 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.22■□□□□ 0.35
CD3DP04234 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 MIR3621-201ENST00000580529 85 ntBASIC17.22■□□□□ 0.35
CD3DP04234 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.22■□□□□ 0.35
CD3DP04234 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CD3DP04234 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.22■□□□□ 0.35
CD3DP04234 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CD3DP04234 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD3DP04234 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CD3DP04234 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms