Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SOD2P04179 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SOD2P04179 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SOD2P04179 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SOD2P04179 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SOD2P04179 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.6■■□□□ 1.05
SOD2P04179 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SOD2P04179 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.6■■□□□ 1.05
SOD2P04179 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.6■■□□□ 1.05
SOD2P04179 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SOD2P04179 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.6■■□□□ 1.05
SOD2P04179 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SOD2P04179 AC027702.1-201ENST00000563810 1770 ntBASIC21.59■■□□□ 1.05
SOD2P04179 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.59■■□□□ 1.05
SOD2P04179 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SOD2P04179 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.59■■□□□ 1.05
SOD2P04179 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 AL135905.2-201ENST00000584934 1404 ntBASIC21.59■■□□□ 1.05
SOD2P04179 AP001412.1-201ENST00000608405 714 ntBASIC21.59■■□□□ 1.05
SOD2P04179 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SOD2P04179 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.59■■□□□ 1.05
SOD2P04179 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SOD2P04179 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SOD2P04179 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.58■■□□□ 1.05
SOD2P04179 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SOD2P04179 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SOD2P04179 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SOD2P04179 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SOD2P04179 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.58■■□□□ 1.05
SOD2P04179 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.58■■□□□ 1.05
SOD2P04179 AL049637.2-201ENST00000641778 930 ntBASIC21.58■■□□□ 1.05
SOD2P04179 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SOD2P04179 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
SOD2P04179 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SOD2P04179 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
SOD2P04179 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.57■■□□□ 1.04
SOD2P04179 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.57■■□□□ 1.04
SOD2P04179 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.57■■□□□ 1.04
SOD2P04179 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.57■■□□□ 1.04
SOD2P04179 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.57■■□□□ 1.04
SOD2P04179 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SOD2P04179 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SOD2P04179 KRT8P36-201ENST00000489121 1440 ntBASIC21.56■■□□□ 1.04
SOD2P04179 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SOD2P04179 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SOD2P04179 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.56■■□□□ 1.04
SOD2P04179 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SOD2P04179 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SOD2P04179 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SOD2P04179 TSPY7P-201ENST00000431358 1114 ntBASIC21.56■■□□□ 1.04
SOD2P04179 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
SOD2P04179 AC023632.3-201ENST00000521633 145 ntBASIC21.56■■□□□ 1.04
SOD2P04179 PRKY-204ENST00000533551 1019 ntBASIC21.56■■□□□ 1.04
SOD2P04179 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.56■■□□□ 1.04
SOD2P04179 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.56■■□□□ 1.04
SOD2P04179 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.56■■□□□ 1.04
SOD2P04179 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.56■■□□□ 1.04
SOD2P04179 MIR2861-201ENST00000636310 90 ntBASIC21.56■■□□□ 1.04
SOD2P04179 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
SOD2P04179 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SOD2P04179 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SOD2P04179 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.55■■□□□ 1.04
SOD2P04179 KRT17P2-201ENST00000300992 1314 ntBASIC21.55■■□□□ 1.04
SOD2P04179 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SOD2P04179 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.55■■□□□ 1.04
SOD2P04179 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.55■■□□□ 1.04
SOD2P04179 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.55■■□□□ 1.04
SOD2P04179 RARRES2P10-201ENST00000564312 460 ntBASIC21.55■■□□□ 1.04
SOD2P04179 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SOD2P04179 REXO1L12P-201ENST00000622156 912 ntBASIC21.55■■□□□ 1.04
SOD2P04179 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.55■■□□□ 1.04
SOD2P04179 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.55■■□□□ 1.04
SOD2P04179 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.55■■□□□ 1.04
SOD2P04179 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SOD2P04179 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms