Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DQB1P01920 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DQB1P01920 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DQB1P01920 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 GUSBP5-201ENST00000418136 578 ntBASIC17.58■□□□□ 0.4
HLA-DQB1P01920 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DQB1P01920 TMEM179-206ENST00000616017 1645 ntBASIC17.58■□□□□ 0.4
HLA-DQB1P01920 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 AL512631.2-201ENST00000604634 923 ntBASIC17.57■□□□□ 0.4
HLA-DQB1P01920 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DQB1P01920 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.56■□□□□ 0.4
HLA-DQB1P01920 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 AL138724.1-201ENST00000606771 1088 ntBASIC17.56■□□□□ 0.4
HLA-DQB1P01920 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DQB1P01920 TREX1-205ENST00000625293 1783 ntBASIC17.56■□□□□ 0.4
HLA-DQB1P01920 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 SMUG1P1-201ENST00000590640 811 ntBASIC17.55■□□□□ 0.4
HLA-DQB1P01920 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DQB1P01920 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms