Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.97■□□□□ 0.79
CPNE6O95741 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE6O95741 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.97■□□□□ 0.79
CPNE6O95741 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE6O95741 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CPNE6O95741 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE6O95741 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CPNE6O95741 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE6O95741 AC007322.3-201ENST00000426526 701 ntBASIC19.96■□□□□ 0.79
CPNE6O95741 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE6O95741 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE6O95741 AC093827.2-201ENST00000512654 315 ntBASIC19.96■□□□□ 0.79
CPNE6O95741 UNC93B5-201ENST00000530315 699 ntBASIC19.96■□□□□ 0.79
CPNE6O95741 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.96■□□□□ 0.79
CPNE6O95741 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.96■□□□□ 0.79
CPNE6O95741 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE6O95741 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE6O95741 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE6O95741 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CPNE6O95741 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE6O95741 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE6O95741 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CPNE6O95741 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPNE6O95741 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CPNE6O95741 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CPNE6O95741 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPNE6O95741 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CPNE6O95741 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE6O95741 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.95■□□□□ 0.78
CPNE6O95741 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.95■□□□□ 0.78
CPNE6O95741 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 AC006058.3-201ENST00000606217 1069 ntBASIC19.95■□□□□ 0.78
CPNE6O95741 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE6O95741 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE6O95741 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPNE6O95741 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CPNE6O95741 PKD1P6-201ENST00000343738 4769 ntBASIC19.94■□□□□ 0.78
CPNE6O95741 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE6O95741 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CPNE6O95741 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE6O95741 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE6O95741 AC026366.1-201ENST00000488803 879 ntBASIC19.94■□□□□ 0.78
CPNE6O95741 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CPNE6O95741 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE6O95741 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.94■□□□□ 0.78
CPNE6O95741 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.94■□□□□ 0.78
CPNE6O95741 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CPNE6O95741 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE6O95741 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
CPNE6O95741 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.93■□□□□ 0.78
CPNE6O95741 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.93■□□□□ 0.78
CPNE6O95741 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.93■□□□□ 0.78
CPNE6O95741 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE6O95741 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 KRT18P68-201ENST00000392293 1000 ntBASIC19.92■□□□□ 0.78
CPNE6O95741 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.92■□□□□ 0.78
CPNE6O95741 AP003097.1-201ENST00000530657 1135 ntBASIC19.92■□□□□ 0.78
CPNE6O95741 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPNE6O95741 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.92■□□□□ 0.78
CPNE6O95741 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms