Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX4O95219 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX4O95219 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX4O95219 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SNX4O95219 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX4O95219 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX4O95219 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX4O95219 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.06■□□□□ 0.64
SNX4O95219 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX4O95219 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX4O95219 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX4O95219 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SNX4O95219 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX4O95219 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX4O95219 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SNX4O95219 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNX4O95219 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SNX4O95219 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX4O95219 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 MIR663A-201ENST00000385250 93 ntBASIC19.05■□□□□ 0.64
SNX4O95219 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.05■□□□□ 0.64
SNX4O95219 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX4O95219 AL162412.1-201ENST00000567129 965 ntBASIC19.05■□□□□ 0.64
SNX4O95219 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX4O95219 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX4O95219 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNX4O95219 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
SNX4O95219 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX4O95219 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX4O95219 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SNX4O95219 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX4O95219 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX4O95219 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX4O95219 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX4O95219 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX4O95219 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX4O95219 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SNX4O95219 AL591742.1-201ENST00000604433 565 ntBASIC19.04■□□□□ 0.64
SNX4O95219 FEM1AP1-201ENST00000431297 1995 ntBASIC19.04■□□□□ 0.64
SNX4O95219 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SNX4O95219 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX4O95219 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX4O95219 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX4O95219 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX4O95219 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SNX4O95219 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX4O95219 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX4O95219 ID1-201ENST00000376105 1233 ntBASIC19.03■□□□□ 0.64
SNX4O95219 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.03■□□□□ 0.64
SNX4O95219 NCF1B-203ENST00000435988 1254 ntBASIC19.03■□□□□ 0.64
SNX4O95219 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX4O95219 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX4O95219 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX4O95219 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX4O95219 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX4O95219 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX4O95219 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX4O95219 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX4O95219 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX4O95219 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNX4O95219 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX4O95219 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX4O95219 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX4O95219 AC068338.2-201ENST00000563278 1430 ntBASIC19.02■□□□□ 0.64
SNX4O95219 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX4O95219 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX4O95219 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX4O95219 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNX4O95219 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.02■□□□□ 0.64
SNX4O95219 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms