Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.57■□□□□ 0.88
USP1O94782 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.57■□□□□ 0.88
USP1O94782 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.57■□□□□ 0.88
USP1O94782 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 KRT19P1-201ENST00000405746 1186 ntBASIC20.57■□□□□ 0.88
USP1O94782 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.57■□□□□ 0.88
USP1O94782 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.57■□□□□ 0.88
USP1O94782 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.57■□□□□ 0.88
USP1O94782 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.57■□□□□ 0.88
USP1O94782 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.57■□□□□ 0.88
USP1O94782 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.57■□□□□ 0.88
USP1O94782 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.57■□□□□ 0.88
USP1O94782 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USP1O94782 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP1O94782 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.56■□□□□ 0.88
USP1O94782 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.56■□□□□ 0.88
USP1O94782 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.56■□□□□ 0.88
USP1O94782 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.56■□□□□ 0.88
USP1O94782 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP1O94782 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.56■□□□□ 0.88
USP1O94782 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP1O94782 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.56■□□□□ 0.88
USP1O94782 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
USP1O94782 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP1O94782 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
USP1O94782 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.56■□□□□ 0.88
USP1O94782 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.56■□□□□ 0.88
USP1O94782 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP1O94782 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
USP1O94782 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
USP1O94782 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.55■□□□□ 0.88
USP1O94782 AC007322.3-201ENST00000426526 701 ntBASIC20.55■□□□□ 0.88
USP1O94782 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.55■□□□□ 0.88
USP1O94782 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.55■□□□□ 0.88
USP1O94782 KRT18P61-201ENST00000585825 1298 ntBASIC20.55■□□□□ 0.88
USP1O94782 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.55■□□□□ 0.88
USP1O94782 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP1O94782 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP1O94782 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
USP1O94782 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
USP1O94782 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.54■□□□□ 0.88
USP1O94782 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.54■□□□□ 0.88
USP1O94782 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.54■□□□□ 0.88
USP1O94782 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.54■□□□□ 0.88
USP1O94782 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.54■□□□□ 0.88
USP1O94782 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.54■□□□□ 0.88
USP1O94782 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
USP1O94782 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP1O94782 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.54■□□□□ 0.88
USP1O94782 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.54■□□□□ 0.88
USP1O94782 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP1O94782 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
USP1O94782 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP1O94782 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 AL162430.1-201ENST00000480705 870 ntBASIC20.53■□□□□ 0.88
USP1O94782 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
USP1O94782 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms