Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN11O75508 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN11O75508 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN11O75508 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLDN11O75508 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN11O75508 FP700111.2-201ENST00000619190 1892 ntBASIC20.85■□□□□ 0.93
CLDN11O75508 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CLDN11O75508 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLDN11O75508 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN11O75508 AC007225.1-201ENST00000566331 1836 ntBASIC20.85■□□□□ 0.93
CLDN11O75508 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN11O75508 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN11O75508 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN11O75508 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN11O75508 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN11O75508 AL137060.1-201ENST00000618151 2648 ntBASIC20.84■□□□□ 0.93
CLDN11O75508 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN11O75508 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN11O75508 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.84■□□□□ 0.93
CLDN11O75508 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.84■□□□□ 0.93
CLDN11O75508 HLA-B-256ENST00000639848 1089 ntBASIC20.84■□□□□ 0.93
CLDN11O75508 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN11O75508 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN11O75508 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN11O75508 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN11O75508 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.83■□□□□ 0.93
CLDN11O75508 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN11O75508 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN11O75508 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN11O75508 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN11O75508 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN11O75508 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN11O75508 RNA5SP413-201ENST00000516373 109 ntBASIC20.83■□□□□ 0.93
CLDN11O75508 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN11O75508 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
CLDN11O75508 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN11O75508 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN11O75508 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN11O75508 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.83■□□□□ 0.92
CLDN11O75508 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN11O75508 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN11O75508 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN11O75508 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN11O75508 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CLDN11O75508 AL121603.2-201ENST00000557373 2117 ntBASIC20.83■□□□□ 0.92
CLDN11O75508 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN11O75508 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CLDN11O75508 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN11O75508 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN11O75508 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN11O75508 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN11O75508 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN11O75508 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN11O75508 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CLDN11O75508 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN11O75508 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN11O75508 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN11O75508 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN11O75508 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.81■□□□□ 0.92
CLDN11O75508 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.81■□□□□ 0.92
CLDN11O75508 AC060766.5-201ENST00000590539 871 ntBASIC20.81■□□□□ 0.92
CLDN11O75508 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN11O75508 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN11O75508 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
CLDN11O75508 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN11O75508 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN11O75508 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN11O75508 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN11O75508 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN11O75508 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN11O75508 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN11O75508 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN11O75508 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.8■□□□□ 0.92
CLDN11O75508 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN11O75508 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN11O75508 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN11O75508 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN11O75508 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CLDN11O75508 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms