Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.24■□□□□ 0.99
LRCH4O75427 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH4O75427 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH4O75427 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.24■□□□□ 0.99
LRCH4O75427 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
LRCH4O75427 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH4O75427 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRCH4O75427 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.24■□□□□ 0.99
LRCH4O75427 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRCH4O75427 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.24■□□□□ 0.99
LRCH4O75427 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH4O75427 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH4O75427 AC087633.2-202ENST00000565166 1439 ntBASIC21.23■□□□□ 0.99
LRCH4O75427 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH4O75427 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
LRCH4O75427 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH4O75427 RARRES2P4-201ENST00000514074 484 ntBASIC21.23■□□□□ 0.99
LRCH4O75427 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.23■□□□□ 0.99
LRCH4O75427 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH4O75427 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
LRCH4O75427 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH4O75427 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
LRCH4O75427 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.23■□□□□ 0.99
LRCH4O75427 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.23■□□□□ 0.99
LRCH4O75427 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRCH4O75427 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LRCH4O75427 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH4O75427 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.22■□□□□ 0.99
LRCH4O75427 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH4O75427 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.22■□□□□ 0.99
LRCH4O75427 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.22■□□□□ 0.99
LRCH4O75427 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.22■□□□□ 0.99
LRCH4O75427 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH4O75427 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.22■□□□□ 0.99
LRCH4O75427 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH4O75427 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.22■□□□□ 0.99
LRCH4O75427 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH4O75427 IKBKGP1-201ENST00000612193 1073 ntBASIC21.22■□□□□ 0.99
LRCH4O75427 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH4O75427 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH4O75427 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH4O75427 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.22■□□□□ 0.99
LRCH4O75427 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.22■□□□□ 0.99
LRCH4O75427 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRCH4O75427 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH4O75427 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.21■□□□□ 0.99
LRCH4O75427 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH4O75427 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.21■□□□□ 0.99
LRCH4O75427 AC231657.2-201ENST00000624556 255 ntBASIC21.21■□□□□ 0.99
LRCH4O75427 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRCH4O75427 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRCH4O75427 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH4O75427 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH4O75427 SMG8-203ENST00000578922 2178 ntBASIC21.21■□□□□ 0.99
LRCH4O75427 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH4O75427 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.21■□□□□ 0.99
LRCH4O75427 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRCH4O75427 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.2■□□□□ 0.99
LRCH4O75427 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRCH4O75427 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.2■□□□□ 0.98
LRCH4O75427 AC099778.1-201ENST00000568593 1911 ntBASIC21.2■□□□□ 0.98
LRCH4O75427 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LRCH4O75427 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LRCH4O75427 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.2■□□□□ 0.98
LRCH4O75427 CYP2T1P-201ENST00000432607 1285 ntBASIC21.2■□□□□ 0.98
LRCH4O75427 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRCH4O75427 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.2■□□□□ 0.98
LRCH4O75427 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRCH4O75427 AL356652.1-201ENST00000615962 565 ntBASIC21.2■□□□□ 0.98
LRCH4O75427 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.2■□□□□ 0.98
LRCH4O75427 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.2■□□□□ 0.98
LRCH4O75427 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.2■□□□□ 0.98
LRCH4O75427 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LRCH4O75427 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LRCH4O75427 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.2■□□□□ 0.98
LRCH4O75427 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRCH4O75427 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LRCH4O75427 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.19■□□□□ 0.98
LRCH4O75427 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.19■□□□□ 0.98
LRCH4O75427 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.19■□□□□ 0.98
LRCH4O75427 AC112907.3-201ENST00000577781 2400 ntBASIC21.19■□□□□ 0.98
LRCH4O75427 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.19■□□□□ 0.98
LRCH4O75427 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
LRCH4O75427 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms