Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM3O75382 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM3O75382 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM3O75382 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM3O75382 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM3O75382 AC016405.3-201ENST00000607710 860 ntBASIC18.93■□□□□ 0.62
TRIM3O75382 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM3O75382 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM3O75382 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM3O75382 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM3O75382 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM3O75382 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM3O75382 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM3O75382 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM3O75382 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM3O75382 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM3O75382 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM3O75382 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM3O75382 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM3O75382 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM3O75382 AL512625.2-201ENST00000417533 625 ntBASIC18.92■□□□□ 0.62
TRIM3O75382 RARRES2P4-201ENST00000514074 484 ntBASIC18.92■□□□□ 0.62
TRIM3O75382 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM3O75382 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM3O75382 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM3O75382 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM3O75382 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM3O75382 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM3O75382 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM3O75382 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM3O75382 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM3O75382 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM3O75382 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM3O75382 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM3O75382 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM3O75382 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TRIM3O75382 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM3O75382 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM3O75382 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM3O75382 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM3O75382 SLC29A4P1-201ENST00000398760 971 ntBASIC18.9■□□□□ 0.62
TRIM3O75382 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM3O75382 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM3O75382 AC093787.1-201ENST00000450396 207 ntBASIC18.9■□□□□ 0.62
TRIM3O75382 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM3O75382 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM3O75382 AC142086.2-201ENST00000569753 217 ntBASIC18.9■□□□□ 0.62
TRIM3O75382 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM3O75382 FAM21FP-204ENST00000608637 956 ntBASIC18.9■□□□□ 0.62
TRIM3O75382 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM3O75382 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM3O75382 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRIM3O75382 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM3O75382 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM3O75382 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM3O75382 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM3O75382 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM3O75382 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRIM3O75382 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM3O75382 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM3O75382 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM3O75382 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM3O75382 AL355802.2-201ENST00000402069 882 ntBASIC18.89■□□□□ 0.61
TRIM3O75382 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM3O75382 CDV3P1-201ENST00000471403 739 ntBASIC18.89■□□□□ 0.61
TRIM3O75382 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.89■□□□□ 0.61
TRIM3O75382 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM3O75382 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM3O75382 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM3O75382 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
TRIM3O75382 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM3O75382 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM3O75382 AL157384.1-201ENST00000445995 2473 ntBASIC18.89■□□□□ 0.61
TRIM3O75382 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM3O75382 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM3O75382 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms