Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ZNF253O75346 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF253O75346 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF253O75346 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF253O75346 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF253O75346 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF253O75346 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 LETM1P2-201ENST00000597330 2178 ntBASIC15.79■□□□□ 0.12
ZNF253O75346 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF253O75346 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 UNC93B3-201ENST00000308076 687 ntBASIC15.79■□□□□ 0.12
ZNF253O75346 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.79■□□□□ 0.12
ZNF253O75346 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.79■□□□□ 0.12
ZNF253O75346 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 BX323043.1-201ENST00000641006 1765 ntBASIC15.79■□□□□ 0.12
ZNF253O75346 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF253O75346 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ZNF253O75346 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF253O75346 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF253O75346 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF253O75346 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF253O75346 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ZNF253O75346 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ZNF253O75346 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF253O75346 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.78■□□□□ 0.12
ZNF253O75346 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 AC105233.4-201ENST00000642045 216 ntBASIC15.78■□□□□ 0.12
ZNF253O75346 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ZNF253O75346 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF253O75346 AC007225.1-201ENST00000566331 1836 ntBASIC15.78■□□□□ 0.12
ZNF253O75346 SMG8-203ENST00000578922 2178 ntBASIC15.77■□□□□ 0.12
ZNF253O75346 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ZNF253O75346 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF253O75346 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ZNF253O75346 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 AC135279.3-201ENST00000610945 1311 ntBASIC15.77■□□□□ 0.12
ZNF253O75346 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF253O75346 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF253O75346 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF253O75346 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF253O75346 AC024257.2-201ENST00000549699 147 ntBASIC15.77■□□□□ 0.12
ZNF253O75346 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF253O75346 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF253O75346 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF253O75346 AL136162.1-201ENST00000607711 1078 ntBASIC15.77■□□□□ 0.12
ZNF253O75346 AC073314.1-201ENST00000568729 2216 ntBASIC15.77■□□□□ 0.12
ZNF253O75346 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF253O75346 BX005040.4-201ENST00000637145 1518 ntBASIC15.77■□□□□ 0.11
ZNF253O75346 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF253O75346 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
ZNF253O75346 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ZNF253O75346 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF253O75346 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF253O75346 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF253O75346 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF253O75346 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF253O75346 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF253O75346 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF253O75346 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF253O75346 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF253O75346 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF253O75346 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF253O75346 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF253O75346 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF253O75346 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF253O75346 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.76■□□□□ 0.11
ZNF253O75346 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF253O75346 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms