Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.16■□□□□ 0.66
PLOD3O60568 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.16■□□□□ 0.66
PLOD3O60568 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
PLOD3O60568 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PLOD3O60568 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.15■□□□□ 0.66
PLOD3O60568 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PLOD3O60568 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PLOD3O60568 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.15■□□□□ 0.66
PLOD3O60568 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.15■□□□□ 0.66
PLOD3O60568 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.15■□□□□ 0.66
PLOD3O60568 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.15■□□□□ 0.66
PLOD3O60568 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.15■□□□□ 0.66
PLOD3O60568 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
PLOD3O60568 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.15■□□□□ 0.66
PLOD3O60568 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
PLOD3O60568 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
PLOD3O60568 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PLOD3O60568 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PLOD3O60568 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PLOD3O60568 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.14■□□□□ 0.65
PLOD3O60568 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
PLOD3O60568 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.14■□□□□ 0.65
PLOD3O60568 AC231657.2-201ENST00000624556 255 ntBASIC19.14■□□□□ 0.65
PLOD3O60568 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.14■□□□□ 0.65
PLOD3O60568 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PLOD3O60568 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.14■□□□□ 0.65
PLOD3O60568 FP700111.2-201ENST00000619190 1892 ntBASIC19.14■□□□□ 0.65
PLOD3O60568 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PLOD3O60568 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PLOD3O60568 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.13■□□□□ 0.65
PLOD3O60568 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.13■□□□□ 0.65
PLOD3O60568 MIR2861-201ENST00000636310 90 ntBASIC19.13■□□□□ 0.65
PLOD3O60568 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PLOD3O60568 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.13■□□□□ 0.65
PLOD3O60568 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PLOD3O60568 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PLOD3O60568 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PLOD3O60568 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PLOD3O60568 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PLOD3O60568 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PLOD3O60568 FEM1AP1-201ENST00000431297 1995 ntBASIC19.12■□□□□ 0.65
PLOD3O60568 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PLOD3O60568 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 AC068338.2-201ENST00000563278 1430 ntBASIC19.12■□□□□ 0.65
PLOD3O60568 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PLOD3O60568 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.12■□□□□ 0.65
PLOD3O60568 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 IKBKGP1-201ENST00000612193 1073 ntBASIC19.12■□□□□ 0.65
PLOD3O60568 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PLOD3O60568 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.12■□□□□ 0.65
PLOD3O60568 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PLOD3O60568 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.11■□□□□ 0.65
PLOD3O60568 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.11■□□□□ 0.65
PLOD3O60568 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
PLOD3O60568 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.11■□□□□ 0.65
PLOD3O60568 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PLOD3O60568 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.11■□□□□ 0.65
PLOD3O60568 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PLOD3O60568 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.11■□□□□ 0.65
PLOD3O60568 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms