Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
KDELR3O43731 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.71■□□□□ 0.91
KDELR3O43731 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.71■□□□□ 0.91
KDELR3O43731 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDELR3O43731 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDELR3O43731 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.71■□□□□ 0.91
KDELR3O43731 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.7■□□□□ 0.91
KDELR3O43731 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
KDELR3O43731 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
KDELR3O43731 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDELR3O43731 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.7■□□□□ 0.9
KDELR3O43731 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.7■□□□□ 0.9
KDELR3O43731 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.7■□□□□ 0.9
KDELR3O43731 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.7■□□□□ 0.9
KDELR3O43731 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.7■□□□□ 0.9
KDELR3O43731 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDELR3O43731 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDELR3O43731 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDELR3O43731 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.69■□□□□ 0.9
KDELR3O43731 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.69■□□□□ 0.9
KDELR3O43731 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KDELR3O43731 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.69■□□□□ 0.9
KDELR3O43731 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.69■□□□□ 0.9
KDELR3O43731 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
KDELR3O43731 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KDELR3O43731 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDELR3O43731 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.68■□□□□ 0.9
KDELR3O43731 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KDELR3O43731 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDELR3O43731 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.68■□□□□ 0.9
KDELR3O43731 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.68■□□□□ 0.9
KDELR3O43731 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.68■□□□□ 0.9
KDELR3O43731 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDELR3O43731 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KDELR3O43731 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KDELR3O43731 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KDELR3O43731 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KDELR3O43731 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KDELR3O43731 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.67■□□□□ 0.9
KDELR3O43731 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.67■□□□□ 0.9
KDELR3O43731 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.67■□□□□ 0.9
KDELR3O43731 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.67■□□□□ 0.9
KDELR3O43731 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.67■□□□□ 0.9
KDELR3O43731 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.67■□□□□ 0.9
KDELR3O43731 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.67■□□□□ 0.9
KDELR3O43731 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDELR3O43731 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KDELR3O43731 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KDELR3O43731 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.66■□□□□ 0.9
KDELR3O43731 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.66■□□□□ 0.9
KDELR3O43731 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.66■□□□□ 0.9
KDELR3O43731 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.66■□□□□ 0.9
KDELR3O43731 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDELR3O43731 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
KDELR3O43731 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KDELR3O43731 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
KDELR3O43731 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KDELR3O43731 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KDELR3O43731 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.65■□□□□ 0.9
KDELR3O43731 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.65■□□□□ 0.9
KDELR3O43731 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.65■□□□□ 0.9
KDELR3O43731 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KDELR3O43731 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.65■□□□□ 0.9
KDELR3O43731 KRT18P6-201ENST00000555540 1265 ntBASIC20.65■□□□□ 0.9
KDELR3O43731 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms