Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.67■□□□□ 0.9
RIPK2O43353 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RIPK2O43353 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RIPK2O43353 POU5F1P4-201ENST00000413175 1085 ntBASIC20.67■□□□□ 0.9
RIPK2O43353 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.67■□□□□ 0.9
RIPK2O43353 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.67■□□□□ 0.9
RIPK2O43353 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.67■□□□□ 0.9
RIPK2O43353 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RIPK2O43353 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RIPK2O43353 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.66■□□□□ 0.9
RIPK2O43353 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.66■□□□□ 0.9
RIPK2O43353 AC008764.7-201ENST00000593779 1081 ntBASIC20.66■□□□□ 0.9
RIPK2O43353 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RIPK2O43353 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPK2O43353 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIPK2O43353 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RIPK2O43353 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RIPK2O43353 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPK2O43353 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.66■□□□□ 0.9
RIPK2O43353 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
RIPK2O43353 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.65■□□□□ 0.9
RIPK2O43353 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK2O43353 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.65■□□□□ 0.9
RIPK2O43353 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK2O43353 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RIPK2O43353 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.65■□□□□ 0.9
RIPK2O43353 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.65■□□□□ 0.9
RIPK2O43353 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK2O43353 AL136116.3-201ENST00000402907 1138 ntBASIC20.65■□□□□ 0.9
RIPK2O43353 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK2O43353 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.65■□□□□ 0.9
RIPK2O43353 AL136162.1-201ENST00000607711 1078 ntBASIC20.65■□□□□ 0.9
RIPK2O43353 AC008175.2-201ENST00000612840 297 ntBASIC20.65■□□□□ 0.9
RIPK2O43353 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIPK2O43353 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RIPK2O43353 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.65■□□□□ 0.9
RIPK2O43353 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK2O43353 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK2O43353 AL691432.2-201ENST00000607222 2038 ntBASIC20.65■□□□□ 0.9
RIPK2O43353 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.65■□□□□ 0.9
RIPK2O43353 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RIPK2O43353 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.64■□□□□ 0.9
RIPK2O43353 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK2O43353 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.64■□□□□ 0.89
RIPK2O43353 AC099791.1-201ENST00000416440 715 ntBASIC20.64■□□□□ 0.89
RIPK2O43353 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK2O43353 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK2O43353 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.64■□□□□ 0.89
RIPK2O43353 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK2O43353 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 AC005332.7-201ENST00000614046 2005 ntBASIC20.64■□□□□ 0.89
RIPK2O43353 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.64■□□□□ 0.89
RIPK2O43353 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK2O43353 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RIPK2O43353 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.64■□□□□ 0.89
RIPK2O43353 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIPK2O43353 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RIPK2O43353 TMEM179-206ENST00000616017 1645 ntBASIC20.64■□□□□ 0.89
RIPK2O43353 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
RIPK2O43353 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.63■□□□□ 0.89
RIPK2O43353 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 TNXA-203ENST00000507684 2038 ntBASIC20.63■□□□□ 0.89
RIPK2O43353 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RIPK2O43353 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RIPK2O43353 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.63■□□□□ 0.89
RIPK2O43353 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms