Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMAD9O15198 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMAD9O15198 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMAD9O15198 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.43■□□□□ 0.54
SMAD9O15198 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.43■□□□□ 0.54
SMAD9O15198 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.43■□□□□ 0.54
SMAD9O15198 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.43■□□□□ 0.54
SMAD9O15198 RARRES2P4-201ENST00000514074 484 ntBASIC18.43■□□□□ 0.54
SMAD9O15198 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.43■□□□□ 0.54
SMAD9O15198 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SMAD9O15198 AC069236.1-201ENST00000604339 616 ntBASIC18.43■□□□□ 0.54
SMAD9O15198 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.43■□□□□ 0.54
SMAD9O15198 FAM21FP-204ENST00000608637 956 ntBASIC18.43■□□□□ 0.54
SMAD9O15198 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SMAD9O15198 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.43■□□□□ 0.54
SMAD9O15198 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMAD9O15198 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMAD9O15198 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SMAD9O15198 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMAD9O15198 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMAD9O15198 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMAD9O15198 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMAD9O15198 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.42■□□□□ 0.54
SMAD9O15198 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMAD9O15198 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SMAD9O15198 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMAD9O15198 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SMAD9O15198 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.42■□□□□ 0.54
SMAD9O15198 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMAD9O15198 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.42■□□□□ 0.54
SMAD9O15198 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SMAD9O15198 AC011484.1-201ENST00000377652 1995 ntBASIC18.42■□□□□ 0.54
SMAD9O15198 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.42■□□□□ 0.54
SMAD9O15198 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMAD9O15198 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMAD9O15198 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMAD9O15198 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMAD9O15198 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMAD9O15198 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMAD9O15198 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
SMAD9O15198 RNF165-205ENST00000588679 2904 ntBASIC18.41■□□□□ 0.54
SMAD9O15198 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMAD9O15198 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.41■□□□□ 0.54
SMAD9O15198 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.41■□□□□ 0.54
SMAD9O15198 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 AC133552.2-202ENST00000575694 574 ntBASIC18.41■□□□□ 0.54
SMAD9O15198 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.41■□□□□ 0.54
SMAD9O15198 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.41■□□□□ 0.54
SMAD9O15198 OR10C1-204ENST00000622521 1039 ntBASIC18.41■□□□□ 0.54
SMAD9O15198 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.41■□□□□ 0.54
SMAD9O15198 AC008694.1-202ENST00000636953 945 ntBASIC18.41■□□□□ 0.54
SMAD9O15198 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SMAD9O15198 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SMAD9O15198 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMAD9O15198 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMAD9O15198 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SMAD9O15198 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMAD9O15198 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMAD9O15198 AC121338.2-201ENST00000622535 1744 ntBASIC18.4■□□□□ 0.54
SMAD9O15198 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD9O15198 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SMAD9O15198 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.4■□□□□ 0.54
SMAD9O15198 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD9O15198 NCF1B-203ENST00000435988 1254 ntBASIC18.4■□□□□ 0.54
SMAD9O15198 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.4■□□□□ 0.54
SMAD9O15198 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.4■□□□□ 0.54
SMAD9O15198 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.4■□□□□ 0.54
SMAD9O15198 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.4■□□□□ 0.54
SMAD9O15198 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.4■□□□□ 0.54
SMAD9O15198 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD9O15198 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMAD9O15198 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SMAD9O15198 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.4■□□□□ 0.54
SMAD9O15198 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMAD9O15198 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMAD9O15198 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD9O15198 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
SMAD9O15198 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD9O15198 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD9O15198 AC093787.1-201ENST00000450396 207 ntBASIC18.39■□□□□ 0.53
SMAD9O15198 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.39■□□□□ 0.53
SMAD9O15198 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.39■□□□□ 0.53
SMAD9O15198 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.39■□□□□ 0.53
SMAD9O15198 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms