Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTL1A6NKG5 HES2-206ENST00000489730 730 ntTSL 2 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 AC110285.5-201ENST00000611501 352 ntBASIC27.21■■□□□ 1.95
RTL1A6NKG5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
RTL1A6NKG5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTL1A6NKG5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
RTL1A6NKG5 AC027702.1-201ENST00000563810 1770 ntBASIC27.2■■□□□ 1.95
RTL1A6NKG5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC27.2■■□□□ 1.95
RTL1A6NKG5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RTL1A6NKG5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
RTL1A6NKG5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC27.2■■□□□ 1.94
RTL1A6NKG5 AC023632.3-201ENST00000521633 145 ntBASIC27.2■■□□□ 1.94
RTL1A6NKG5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC27.2■■□□□ 1.94
RTL1A6NKG5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
RTL1A6NKG5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.2■■□□□ 1.94
RTL1A6NKG5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RTL1A6NKG5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC27.2■■□□□ 1.94
RTL1A6NKG5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
RTL1A6NKG5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTL1A6NKG5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTL1A6NKG5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTL1A6NKG5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC27.19■■□□□ 1.94
RTL1A6NKG5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RTL1A6NKG5 KRT8P36-201ENST00000489121 1440 ntBASIC27.19■■□□□ 1.94
RTL1A6NKG5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTL1A6NKG5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RTL1A6NKG5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
RTL1A6NKG5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC27.19■■□□□ 1.94
RTL1A6NKG5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
RTL1A6NKG5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.19■■□□□ 1.94
RTL1A6NKG5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC27.19■■□□□ 1.94
RTL1A6NKG5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTL1A6NKG5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC27.18■■□□□ 1.94
RTL1A6NKG5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
RTL1A6NKG5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
RTL1A6NKG5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
RTL1A6NKG5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 RARRES2P10-201ENST00000564312 460 ntBASIC27.18■■□□□ 1.94
RTL1A6NKG5 MIR2861-201ENST00000636310 90 ntBASIC27.18■■□□□ 1.94
RTL1A6NKG5 AL049637.2-201ENST00000641778 930 ntBASIC27.18■■□□□ 1.94
RTL1A6NKG5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RTL1A6NKG5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 AL135905.2-201ENST00000584934 1404 ntBASIC27.17■■□□□ 1.94
RTL1A6NKG5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
RTL1A6NKG5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTL1A6NKG5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RTL1A6NKG5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL1A6NKG5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RTL1A6NKG5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RTL1A6NKG5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC27.16■■□□□ 1.94
RTL1A6NKG5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL1A6NKG5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL1A6NKG5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTL1A6NKG5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RTL1A6NKG5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTL1A6NKG5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC27.15■■□□□ 1.94
RTL1A6NKG5 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.15■■□□□ 1.94
RTL1A6NKG5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC27.15■■□□□ 1.94
RTL1A6NKG5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC27.15■■□□□ 1.94
RTL1A6NKG5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC27.15■■□□□ 1.94
RTL1A6NKG5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RTL1A6NKG5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RTL1A6NKG5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms