Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC66A2RUB6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC66A2RUB6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC66A2RUB6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC66A2RUB6 PLK5-205ENST00000642079 1969 ntBASIC21.94■■□□□ 1.1
CCDC66A2RUB6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 TSPY26P-201ENST00000476365 1326 ntBASIC21.93■■□□□ 1.1
CCDC66A2RUB6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC66A2RUB6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 AC005082.1-201ENST00000413042 2259 ntBASIC21.92■■□□□ 1.1
CCDC66A2RUB6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.92■■□□□ 1.1
CCDC66A2RUB6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC66A2RUB6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 BX005040.4-201ENST00000637145 1518 ntBASIC21.91■■□□□ 1.1
CCDC66A2RUB6 PCDHAC2-203ENST00000615316 3011 ntBASIC21.91■■□□□ 1.1
CCDC66A2RUB6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC66A2RUB6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC66A2RUB6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC66A2RUB6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC66A2RUB6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CCDC66A2RUB6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC66A2RUB6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 PBX2P1-201ENST00000493219 1291 ntBASIC21.89■■□□□ 1.09
CCDC66A2RUB6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.89■■□□□ 1.09
CCDC66A2RUB6 AC106739.1-201ENST00000617035 715 ntBASIC21.89■■□□□ 1.09
CCDC66A2RUB6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms