Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 AC073648.6-201ENST00000641589 218 ntBASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMIM28A0A1B0GU29 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 AC098590.1-201ENST00000468126 897 ntBASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.9■■□□□ 1.1
SMIM28A0A1B0GU29 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.89■■□□□ 1.1
SMIM28A0A1B0GU29 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 AC005229.4-201ENST00000610085 2198 ntBASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM28A0A1B0GU29 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 AC005829.2-201ENST00000571422 1056 ntBASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 AC066615.1-201ENST00000640911 628 ntBASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 AL121603.2-201ENST00000557373 2117 ntBASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM28A0A1B0GU29 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms