Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV34A0A0B4J273 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRAV34A0A0B4J273 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.1
TRAV34A0A0B4J273 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV34A0A0B4J273 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV34A0A0B4J273 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV34A0A0B4J273 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV34A0A0B4J273 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV34A0A0B4J273 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 SMG8-203ENST00000578922 2178 ntBASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 AC009299.2-201ENST00000482477 511 ntBASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV34A0A0B4J273 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 FZD10-202ENST00000539839 3282 ntBASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 AC116562.4-201ENST00000641316 2276 ntBASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV34A0A0B4J273 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms