Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 AC233992.3-201ENST00000607491 485 ntBASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 AC055733.4-201ENST00000638462 1354 ntBASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 AL136116.3-201ENST00000402907 1138 ntBASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV13-1A0A0B4J241 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 AL512408.1-201ENST00000569378 2000 ntBASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 IGHV3-19-201ENST00000521488 291 ntBASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 AC133561.4-201ENST00000566112 224 ntBASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 PKD1P1-201ENST00000458669 6805 ntBASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV13-1A0A0B4J241 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 UNC93B3-201ENST00000308076 687 ntBASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 AC105233.4-201ENST00000642045 216 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms