Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RPL7L1P12-201ENST00000417594 729 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 RPE-207ENST00000435437 858 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC9.52□□□□□ -0.89
UBE4BO95155 AL590609.1-201ENST00000442164 328 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 AL157714.1-201ENST00000448964 625 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 PPP1R8P1-201ENST00000452549 1044 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 RN7SL401P-201ENST00000470065 298 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 RN7SL302P-201ENST00000475999 300 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 CSTA-202ENST00000479204 821 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 MS4A6A-217ENST00000533023 780 ntTSL 3 BASIC9.52□□□□□ -0.89
UBE4BO95155 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC9.52□□□□□ -0.89
UBE4BO95155 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC9.52□□□□□ -0.89
UBE4BO95155 AC006927.1-201ENST00000544818 498 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC9.52□□□□□ -0.89
UBE4BO95155 FRG2HP-201ENST00000568807 832 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 AL645949.1-202ENST00000600073 242 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 AC009053.4-201ENST00000614366 108 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 AC010223.1-201ENST00000625092 279 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
UBE4BO95155 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBE4BO95155 AL049842.1-201ENST00000402902 1479 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 ANKRD20A11P-206ENST00000451663 3717 ntBASIC9.52□□□□□ -0.89
UBE4BO95155 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC9.51□□□□□ -0.89
UBE4BO95155 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 AC009053.1-202ENST00000563377 2051 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 AC008895.1-201ENST00000624074 2622 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 AC136428.3-201ENST00000566387 1990 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE4BO95155 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
UBE4BO95155 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC9.51□□□□□ -0.89
UBE4BO95155 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE4BO95155 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 SNRPGP11-201ENST00000411777 232 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 IFITM4P-207ENST00000441380 420 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 RPL5P29-201ENST00000482972 894 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 AP004245.1-201ENST00000530434 259 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 OR4A19P-201ENST00000533579 1103 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 ASB8-211ENST00000539528 839 ntTSL 3 BASIC9.51□□□□□ -0.89
UBE4BO95155 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE4BO95155 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE4BO95155 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE4BO95155 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE4BO95155 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC9.51□□□□□ -0.89
UBE4BO95155 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 AL445933.1-201ENST00000434240 2242 ntBASIC9.51□□□□□ -0.89
UBE4BO95155 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
UBE4BO95155 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.51□□□□□ -0.89
UBE4BO95155 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBE4BO95155 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 ADGRE3-205ENST00000599900 2099 ntTSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 MIR637-201ENST00000385000 99 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
UBE4BO95155 TUBB4BP7-201ENST00000406999 1234 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 AL513302.1-201ENST00000415679 428 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 RPL10P5-201ENST00000427719 639 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms