Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GALC-203ENST00000393569 2547 ntTSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NPIPA3F8WFD2 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC013391.3-201ENST00000567484 1456 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AL031118.1-201ENST00000607727 2955 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC105233.5-202ENST00000642083 4132 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 SNORD3G-201ENST00000362796 215 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 MIR637-201ENST00000385000 99 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 U3.17-201ENST00000390863 203 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 LYG1-202ENST00000409448 1038 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC064862.3-201ENST00000411435 571 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 OR13D3P-201ENST00000412501 937 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC012354.2-201ENST00000423051 461 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 RPE-207ENST00000435437 858 ntTSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 ST13P18-201ENST00000456632 1027 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 HTR4-204ENST00000517929 1201 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC063947.2-201ENST00000547000 1256 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AL049833.1-201ENST00000557745 840 ntTSL 3 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC109630.1-201ENST00000558846 730 ntTSL 3 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC090164.1-201ENST00000560214 664 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 MIR3663-201ENST00000583207 97 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 EIF5AP3-201ENST00000589460 462 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 HDAC1P2-202ENST00000602936 807 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC215522.1-201ENST00000615488 446 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC027176.3-201ENST00000624460 586 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 OR6C6-201ENST00000358433 1521 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AC131935.2-201ENST00000623649 1371 ntBASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NPIPA3F8WFD2 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NPIPA3F8WFD2 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms