Protein–RNA interactions for Protein: U3KQA8

Uncharacterized protein, humanhuman

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQA8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U3KQA8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.68■□□□□ 0.74
U3KQA8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
U3KQA8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.68■□□□□ 0.74
U3KQA8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.68■□□□□ 0.74
U3KQA8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.68■□□□□ 0.74
U3KQA8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U3KQA8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U3KQA8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U3KQA8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
U3KQA8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U3KQA8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U3KQA8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
U3KQA8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
U3KQA8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.67■□□□□ 0.74
U3KQA8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
U3KQA8 TSPY15P-201ENST00000457163 923 ntBASIC19.67■□□□□ 0.74
U3KQA8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.67■□□□□ 0.74
U3KQA8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.67■□□□□ 0.74
U3KQA8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U3KQA8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.67■□□□□ 0.74
U3KQA8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
U3KQA8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
U3KQA8 AC113410.3-201ENST00000623366 203 ntBASIC19.67■□□□□ 0.74
U3KQA8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
U3KQA8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.67■□□□□ 0.74
U3KQA8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
U3KQA8 AL390719.1-204ENST00000412397 1219 ntBASIC19.66■□□□□ 0.74
U3KQA8 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.66■□□□□ 0.74
U3KQA8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
U3KQA8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.65■□□□□ 0.74
U3KQA8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
U3KQA8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.65■□□□□ 0.74
U3KQA8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.65■□□□□ 0.74
U3KQA8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
U3KQA8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.65■□□□□ 0.74
U3KQA8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.65■□□□□ 0.74
U3KQA8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.65■□□□□ 0.74
U3KQA8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.65■□□□□ 0.74
U3KQA8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
U3KQA8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
U3KQA8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
U3KQA8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.65■□□□□ 0.74
U3KQA8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
U3KQA8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.65■□□□□ 0.74
U3KQA8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
U3KQA8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
U3KQA8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.64■□□□□ 0.74
U3KQA8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
U3KQA8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.64■□□□□ 0.73
U3KQA8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.64■□□□□ 0.73
U3KQA8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.64■□□□□ 0.73
U3KQA8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.64■□□□□ 0.73
U3KQA8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
U3KQA8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.64■□□□□ 0.73
U3KQA8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.64■□□□□ 0.73
U3KQA8 AC011484.1-201ENST00000377652 1995 ntBASIC19.64■□□□□ 0.73
U3KQA8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U3KQA8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.63■□□□□ 0.73
U3KQA8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U3KQA8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
U3KQA8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
U3KQA8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U3KQA8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
U3KQA8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U3KQA8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U3KQA8 KRT17P2-201ENST00000300992 1314 ntBASIC19.63■□□□□ 0.73
U3KQA8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
U3KQA8 FAM210CP-201ENST00000445714 574 ntBASIC19.63■□□□□ 0.73
U3KQA8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U3KQA8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.63■□□□□ 0.73
U3KQA8 RARRES2P10-201ENST00000564312 460 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms