Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 TNRC18P3-201ENST00000441896 2691 ntBASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 AL162377.1-201ENST00000618844 1793 ntBASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 AL138781.2-201ENST00000617896 1843 ntBASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 AL512408.1-201ENST00000569378 2000 ntBASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 AC108673.1-201ENST00000510422 1159 ntBASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 AC104564.3-201ENST00000582367 638 ntBASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS1Q9Y6A9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS1Q9Y6A9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 AC104581.1-202ENST00000635932 2618 ntBASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPCS1Q9Y6A9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPCS1Q9Y6A9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS1Q9Y6A9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPCS1Q9Y6A9 AC090877.2-201ENST00000558441 1738 ntBASIC14.01□□□□□ -0.17
SPCS1Q9Y6A9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms