Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 MIR4785-201ENST00000585005 73 ntBASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 AC233723.2-201ENST00000623798 2106 ntBASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCN10AQ9Y5Y9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 REXO1L12P-201ENST00000622156 912 ntBASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCN10AQ9Y5Y9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 KRT17P2-201ENST00000300992 1314 ntBASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 AC012306.2-201ENST00000609350 630 ntBASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCN10AQ9Y5Y9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 AL390719.1-204ENST00000412397 1219 ntBASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 AP001412.1-201ENST00000608405 714 ntBASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 MIR2861-201ENST00000636310 90 ntBASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SCN10AQ9Y5Y9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 AC087499.1-201ENST00000418141 1075 ntBASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 FAM210CP-201ENST00000445714 574 ntBASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms