Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 FEM1AP4-201ENST00000443167 1987 ntBASIC14.02□□□□□ -0.17
LINC00588Q9Y4M8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 AC121338.2-201ENST00000622535 1744 ntBASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 AC026366.1-201ENST00000488803 879 ntBASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 AP003097.1-201ENST00000530657 1135 ntBASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 PNMA6B-201ENST00000538162 1200 ntBASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00588Q9Y4M8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 AC006058.3-201ENST00000606217 1069 ntBASIC14□□□□□ -0.17
LINC00588Q9Y4M8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00588Q9Y4M8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 WWC2-AS2-201ENST00000578387 2183 ntBASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 AC027702.1-201ENST00000563810 1770 ntBASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00588Q9Y4M8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 PRORSD1P-201ENST00000295112 541 ntBASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 AC008687.6-201ENST00000596318 630 ntBASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms