Protein–RNA interactions for Protein: Q9UEE9

CFDP1, Craniofacial development protein 1, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1Q9UEE9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 KRT17P2-201ENST00000300992 1314 ntBASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFDP1Q9UEE9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 AC113410.3-201ENST00000623366 203 ntBASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.17■■■□□ 2.58
CFDP1Q9UEE9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 AL135905.2-201ENST00000584934 1404 ntBASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 FAM210CP-201ENST00000445714 574 ntBASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CFDP1Q9UEE9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 LINC01023-201ENST00000606054 436 ntBASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 AP001412.1-201ENST00000608405 714 ntBASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFDP1Q9UEE9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 TSPY15P-201ENST00000457163 923 ntBASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 RARRES2P10-201ENST00000564312 460 ntBASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFDP1Q9UEE9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFDP1Q9UEE9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFDP1Q9UEE9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 ECEL1P1-201ENST00000373592 1742 ntBASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 MIR4785-201ENST00000585005 73 ntBASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.11■■■□□ 2.57
CFDP1Q9UEE9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 AC011484.1-201ENST00000377652 1995 ntBASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFDP1Q9UEE9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms