Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 MKRN4P-201ENST00000444706 1521 ntBASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 AL162412.1-201ENST00000567129 965 ntBASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKIPSDQ9NZQ3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 KRT16P2-201ENST00000414673 1423 ntBASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKIPSDQ9NZQ3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 AC006128.1-201ENST00000624704 1661 ntBASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
NCKIPSDQ9NZQ3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.58■□□□□ 0.88
NCKIPSDQ9NZQ3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCKIPSDQ9NZQ3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NCKIPSDQ9NZQ3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCKIPSDQ9NZQ3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.58■□□□□ 0.88
NCKIPSDQ9NZQ3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
NCKIPSDQ9NZQ3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCKIPSDQ9NZQ3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKIPSDQ9NZQ3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 MIPEPP3-201ENST00000412105 444 ntBASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 AC092118.2-201ENST00000613495 667 ntBASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.56■□□□□ 0.88
NCKIPSDQ9NZQ3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms