Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
C9orf78Q9NZ63 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C9orf78Q9NZ63 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 TSPY20P-201ENST00000450910 630 ntBASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 MIR2861-201ENST00000636310 90 ntBASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
C9orf78Q9NZ63 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.64■■□□□ 1.69
C9orf78Q9NZ63 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
C9orf78Q9NZ63 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
C9orf78Q9NZ63 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 C2orf69P4-201ENST00000565394 541 ntBASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
C9orf78Q9NZ63 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C9orf78Q9NZ63 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 ABHD17AP1-201ENST00000358206 933 ntBASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.61■■□□□ 1.69
C9orf78Q9NZ63 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.6■■□□□ 1.69
C9orf78Q9NZ63 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.59■■□□□ 1.69
C9orf78Q9NZ63 AC006128.1-201ENST00000624704 1661 ntBASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 KRT8P36-201ENST00000489121 1440 ntBASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.58■■□□□ 1.69
C9orf78Q9NZ63 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms