Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCM2LQ9NUG4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 AC098818.2-201ENST00000564925 2320 ntBASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TSPY26P-201ENST00000476365 1326 ntBASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.37■□□□□ 0.69
CCM2LQ9NUG4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 AP005435.1-201ENST00000529293 1178 ntBASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCM2LQ9NUG4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 BX005040.4-201ENST00000637145 1518 ntBASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCM2LQ9NUG4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 HLA-L-209ENST00000420110 1011 ntBASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 AC123595.1-201ENST00000440769 1046 ntBASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCM2LQ9NUG4 AC011484.1-201ENST00000377652 1995 ntBASIC19.33■□□□□ 0.69
CCM2LQ9NUG4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms