Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 POU5F1P4-201ENST00000413175 1085 ntBASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 AC012414.1-201ENST00000556676 535 ntBASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 AF213884.3-201ENST00000563833 479 ntBASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 AC005837.3-201ENST00000612163 286 ntBASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB16Q9NRJ7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHB16Q9NRJ7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB16Q9NRJ7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB16Q9NRJ7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHB16Q9NRJ7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 AC007225.1-201ENST00000566331 1836 ntBASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 MIR638-201ENST00000385237 100 ntBASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB16Q9NRJ7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 AC011484.1-201ENST00000377652 1995 ntBASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 AP005212.1-201ENST00000581547 1997 ntBASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 AC120498.10-201ENST00000621827 505 ntBASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 AL358852.1-201ENST00000623174 1268 ntBASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB16Q9NRJ7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 SUDS3P1-201ENST00000505831 966 ntBASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 AL031432.3-201ENST00000607698 485 ntBASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 AL136967.2-201ENST00000623968 743 ntBASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms