Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CTPS2Q9NRF8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTPS2Q9NRF8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 SLC7A5P2-201ENST00000553010 536 ntBASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 AFG3L1P-217ENST00000557444 2447 ntBASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.94■□□□□ 0.62
CTPS2Q9NRF8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 KRT18P5-201ENST00000436075 1291 ntBASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 AC120498.10-201ENST00000621827 505 ntBASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTPS2Q9NRF8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 AL512408.1-201ENST00000569378 2000 ntBASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 MIR935-201ENST00000401179 91 ntBASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CTPS2Q9NRF8 AIRN-201ENST00000601203 4374 ntBASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 MIR5787-201ENST00000611784 55 ntBASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 RARRES2P11-201ENST00000635158 484 ntBASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS2Q9NRF8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms