Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 BX842568.3-201ENST00000418104 571 ntBASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C12orf4Q9NQ89 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C12orf4Q9NQ89 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 AC006128.1-201ENST00000624704 1661 ntBASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.62■□□□□ 0.41
C12orf4Q9NQ89 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
C12orf4Q9NQ89 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 AC133561.4-201ENST00000566112 224 ntBASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 MIR4767-201ENST00000582827 78 ntBASIC17.6■□□□□ 0.41
C12orf4Q9NQ89 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms