Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 AL121603.2-201ENST00000557373 2117 ntBASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 MIR2861-201ENST00000636310 90 ntBASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEUROD4Q9HD90 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 ID1-201ENST00000376105 1233 ntBASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 AC004911.1-201ENST00000416316 871 ntBASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 CDV3P1-201ENST00000471403 739 ntBASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 UBE2DNL-204ENST00000602536 740 ntBASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 MYCNOS-205ENST00000641950 531 ntBASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEUROD4Q9HD90 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 KRT18P61-201ENST00000585825 1298 ntBASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 FAM21FP-204ENST00000608637 956 ntBASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEUROD4Q9HD90 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 AL162377.1-201ENST00000618844 1793 ntBASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEUROD4Q9HD90 AL512408.1-201ENST00000569378 2000 ntBASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms