Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 RBM17P1-201ENST00000453646 1190 ntBASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 AC073195.1-201ENST00000607241 877 ntBASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZFYVE28Q9HCC9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 UNC93B2-201ENST00000285383 730 ntBASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 NBPF21P-201ENST00000425093 1451 ntBASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.48■■□□□ 1.35
ZFYVE28Q9HCC9 AC113347.1-201ENST00000413321 391 ntBASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 KRT8P9-201ENST00000558927 1449 ntBASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.47■■□□□ 1.35
ZFYVE28Q9HCC9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 AC079598.2-202ENST00000546624 1451 ntBASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 LINC01568-207ENST00000641790 1380 ntBASIC23.46■■□□□ 1.35
ZFYVE28Q9HCC9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
ZFYVE28Q9HCC9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
ZFYVE28Q9HCC9 FAM99A-202ENST00000538190 1989 ntBASIC23.45■■□□□ 1.35
ZFYVE28Q9HCC9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 KRT18P57-201ENST00000443599 1254 ntBASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 NUDT16P1-203ENST00000513809 620 ntBASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 AP000525.1-201ENST00000608286 694 ntBASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZFYVE28Q9HCC9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 AL031963.3-201ENST00000606441 850 ntBASIC23.44■■□□□ 1.34
ZFYVE28Q9HCC9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms