Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 POU5F1P4-201ENST00000413175 1085 ntBASIC19.34■□□□□ 0.69
NANOGQ9H9S0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 AC008175.2-201ENST00000612840 297 ntBASIC19.34■□□□□ 0.69
NANOGQ9H9S0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NANOGQ9H9S0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NANOGQ9H9S0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.33■□□□□ 0.69
NANOGQ9H9S0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
NANOGQ9H9S0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NANOGQ9H9S0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.33■□□□□ 0.69
NANOGQ9H9S0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NANOGQ9H9S0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NANOGQ9H9S0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 AC012414.1-201ENST00000556676 535 ntBASIC19.32■□□□□ 0.68
NANOGQ9H9S0 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.32■□□□□ 0.68
NANOGQ9H9S0 MIR2861-201ENST00000636310 90 ntBASIC19.32■□□□□ 0.68
NANOGQ9H9S0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 AC116562.4-201ENST00000641316 2276 ntBASIC19.32■□□□□ 0.68
NANOGQ9H9S0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.32■□□□□ 0.68
NANOGQ9H9S0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NANOGQ9H9S0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.3■□□□□ 0.68
NANOGQ9H9S0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms