Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ALX4Q9H161 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.2■□□□□ 0.34
ALX4Q9H161 AC142381.2-201ENST00000566120 298 ntBASIC17.2■□□□□ 0.34
ALX4Q9H161 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.2■□□□□ 0.34
ALX4Q9H161 AL031432.3-201ENST00000607698 485 ntBASIC17.2■□□□□ 0.34
ALX4Q9H161 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALX4Q9H161 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.2■□□□□ 0.34
ALX4Q9H161 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ALX4Q9H161 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.2■□□□□ 0.34
ALX4Q9H161 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALX4Q9H161 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ALX4Q9H161 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALX4Q9H161 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALX4Q9H161 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ALX4Q9H161 AF213884.3-201ENST00000563833 479 ntBASIC17.19■□□□□ 0.34
ALX4Q9H161 AC133561.4-201ENST00000566112 224 ntBASIC17.19■□□□□ 0.34
ALX4Q9H161 AC136469.2-201ENST00000623944 1028 ntBASIC17.19■□□□□ 0.34
ALX4Q9H161 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.19■□□□□ 0.34
ALX4Q9H161 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALX4Q9H161 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ALX4Q9H161 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALX4Q9H161 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALX4Q9H161 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
ALX4Q9H161 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ALX4Q9H161 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALX4Q9H161 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ALX4Q9H161 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.18■□□□□ 0.34
ALX4Q9H161 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.18■□□□□ 0.34
ALX4Q9H161 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.18■□□□□ 0.34
ALX4Q9H161 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.18■□□□□ 0.34
ALX4Q9H161 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ALX4Q9H161 EDA-201ENST00000338901 1233 ntBASIC17.18■□□□□ 0.34
ALX4Q9H161 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 AC008764.7-201ENST00000593779 1081 ntBASIC17.18■□□□□ 0.34
ALX4Q9H161 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.18■□□□□ 0.34
ALX4Q9H161 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.18■□□□□ 0.34
ALX4Q9H161 AL355001.2-201ENST00000620617 1191 ntBASIC17.18■□□□□ 0.34
ALX4Q9H161 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ALX4Q9H161 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.18■□□□□ 0.34
ALX4Q9H161 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.18■□□□□ 0.34
ALX4Q9H161 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ALX4Q9H161 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ALX4Q9H161 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALX4Q9H161 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.17■□□□□ 0.34
ALX4Q9H161 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
ALX4Q9H161 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.17■□□□□ 0.34
ALX4Q9H161 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.17■□□□□ 0.34
ALX4Q9H161 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.17■□□□□ 0.34
ALX4Q9H161 AP001330.3-201ENST00000520123 633 ntBASIC17.17■□□□□ 0.34
ALX4Q9H161 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.17■□□□□ 0.34
ALX4Q9H161 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.17■□□□□ 0.34
ALX4Q9H161 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.17■□□□□ 0.34
ALX4Q9H161 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.17■□□□□ 0.34
ALX4Q9H161 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.17■□□□□ 0.34
ALX4Q9H161 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ALX4Q9H161 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALX4Q9H161 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.16■□□□□ 0.34
ALX4Q9H161 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.16■□□□□ 0.34
ALX4Q9H161 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.16■□□□□ 0.34
ALX4Q9H161 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALX4Q9H161 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.16■□□□□ 0.34
ALX4Q9H161 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.16■□□□□ 0.34
ALX4Q9H161 SUDS3P1-201ENST00000505831 966 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms