Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
FOXP3Q9BZS1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXP3Q9BZS1 AL391422.3-201ENST00000603791 2761 ntBASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXP3Q9BZS1 AC092720.2-201ENST00000602388 1665 ntBASIC21.02■□□□□ 0.95
FOXP3Q9BZS1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXP3Q9BZS1 AFG3L1P-217ENST00000557444 2447 ntBASIC21.02■□□□□ 0.95
FOXP3Q9BZS1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXP3Q9BZS1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 GXYLT1P5-201ENST00000614548 1189 ntBASIC21■□□□□ 0.95
FOXP3Q9BZS1 AC073111.5-205ENST00000641717 521 ntBASIC21■□□□□ 0.95
FOXP3Q9BZS1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXP3Q9BZS1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21■□□□□ 0.95
FOXP3Q9BZS1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 CDCA4P2-201ENST00000441182 718 ntBASIC20.99■□□□□ 0.95
FOXP3Q9BZS1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms